Title: MOLECULAR GENETIC RELATIONSHIPS OF THE ZOKORS (RODENTIA, MYOSPALACINAE): ANALYSIS OF D-LOOP REGION POLIMORPHISM Tsvirka Marina1, Pavlenko Marina1, Korablev Vladimir1, Pang Junfeng2
1MOLECULAR GENETIC RELATIONSHIPS OF THE ZOKORS
(RODENTIA, MYOSPALACINAE) ANALYSIS OF D-LOOP
REGION POLIMORPHISM Tsvirka Marina1, Pavlenko
Marina1, Korablev Vladimir1, Pang Junfeng2
- 1Institute of Biology and Soil Science, Far
Eastern Branch Russian Academy of Sciences,
Vladivostok, 690022, Russia2Kunming Institute
of Zoology, Chinese Academy of Sciences, Kunming,
650223, Yunnan, China
2(No Transcript)
3PROBLEMS
- Among others subterranean rodents, zokors
(Myospalacinae) are still remains poorly studied
in viewpoint of taxonomy and evolution. Recent
molecular phylogenetic studies have demonstrated
that zokors are closely related to Spalacinae and
Rhyzomyinae in the family Spalacidae (Norris et.
al, 2004 Jansa, Weksler, 2004) - However relationships among the species within
Myospalacinae are not clearly understood.
4PROBLEMS
Genus Myospalax Subgenus Myospalax M. myospalax
M. aspalax M. psilurus Subgenus Eospalax M.
rothschildi M. smithii M. fontanieri ( M.
f.cansus, M. f. rufescens ,
M. f. baileyi) (Corbet, 1991)
Genus Myospalax M. myospalax M. aspalax M.
psilurus Genus Eospalax M. rothschildi M.
smithii M. fontanieri M. cansus M. rufescens
M. baileyi (Zheng, 1994 )
5Map of Zokors Distribution in the Russia
M. myospalax
M. psilurus
2n64
2n44
M. aspalax
2n62
2n62
M. armandii
6Background
- Professor N. N., Vorontsov prominent Russian
biologist was initiator of study of fossorial
rodents in Russia and adjacent countries
- L. Martynova, N. Vorontsov, 1975. Population
cytogenetic of Zokors Chromosomes - L. Martynova, 1976. Chromosomal differentiation
of three species of zokors. - L. Martynova, I. Fomicheva, N. Vorontsov, 1977.
Electrophoretic study of blood protein of zokors.
7Electrophoretic patterns of transferrin (TF) of
zokors (Pavlenko Korablev, 2003 2005)
1
2
3
4
5
- 1. Tf-A M. aspalax, Transbaikalia
- 2. Tf-B M. psilurus, Primorye
- 3. Tf-C M. psilurus, Transbaikalia
- 4. Tf-C1 M. armandii
- 5. Tf-D M. myospalax, Altai region
8Map of Zokors Distribution in the China
M. fontanieri
M. cansus
M. baileyi
2n62
M. rufescens
2n62
M. smithii
M. rothschildi
9- C. Zhou and K. Zhou. The validity of different
zokor species and the genus Eospalax inferred
from mitochondrial gene sequences / Integrative
Zoology 2008 3 290298.
Myospalax and Eospalax genera
10Phylogenetic relationships of zokors based on the
RAPD-PCR analysis (Tsvirka et al., 2009)
M. psilurus
100
4 species groups within genus Myospalax
54
M. smithii
74
M. aspalax M. armandii
100
M. myospalax
11Puzachenko A., Pavlenko M., Korablev V.
Craniological variability of the zokors
(Myospalacinae) with simplified first upper
molar. Abstracts of 11 International Conference
"Rodens et Spatium", 24-28 July 2008, Myshkin
(Russia). P.144 Puzachenko A., Pavlenko M.,
Korablev V. Variability of skulls in Zokors
(Rodentia,Miospalacinae) // Zool. Z. 2009. V. 88.
?1. P. 92-112.
- 3 species groups with taxonomic ranks of the
genera or subgenera - M. myospalax
- M. aspalax and M. armandii
- M. smithii and M. psilurus
12The aims of the present study were
- to determine the systematic position of Myospalax
and Eospalax - to clarify the phylogenetic relationships among
zokor species - to confirm or contradict the taxonomic position
of M. armandii as a distinct species - to confirm or disprove previous data concerning
genetic differentiation of Manchurian zokors M.
psilurus from Khanka Plain and Transbaikalia.
13MATERIAL
- 54 specimens of 7 species from 30 different
localities in Russia and China. - 1 specimen of Spalax judaei from GenBank was
used as outgroup.
M. cansus
14METHODS
Sequencing 5 end of the D-loop
- Phylogenetic reconstructions using MEGA 4 (Tamura
et al., 2007) Neighbor-Joining (NJ), Maximum
Parsimony (MP), Minimum Evolution (ME),
unweighted pair-group method with arithmetic
averaging (UPGMA) - Calculation of genetic distances based on Kimura
two-parametric (K2P) estimator.
15RESULTS
- The alignment of the mt DNA sequences of 7 taxa
comprises 518 nucleotides. - 206 (40) nucleotides were variable.
- 187 (36) nucleotides were parsimony informative.
- The average ratio of transition/transvertion was
3.58.
16NJ and UPGMA trees of Zokors based on the D-loop
sequences (MEGA-4.1)
M. psilurus Primorye
M. psilurus
M. psilurus Zabaykalye
M. aspalax M. armandii
M. smithii M. cansus M. rufescens
M. myospalax
17Interspecific relationships within the genus
Myospalax
1 2 3 4 5 6 7 8
1. M. cansus -
2. M. smithii 0.120 -
3. M. rufescens 0.123 0.062 -
4. M. aspalax 0.190 0.167 0.164 -
5. M. armandii 0.185 0.185 0.181 0.070 -
6. M. myospalax 0.225 0.226 0. 224 0.177 0.190 -
7. M. psilurus (?) 0.158 0.154 0.154 0.076 0.084 0.159 -
8. M. psilurus (?) 0.164 0.164 0.160 0.108 0.104 0.181 0.063 -
Estimate value of Kimura two-parametric distance
matrix for 8 taxa of Myospalax
18Genetic distances for nuclear (RAPD) and
mitochondrial (D-loop) DNA
Distances RAPD D-loop
within species 0.05 0.003-0.028
within forms of M. psilurus 0.04-0.05 0.003
between species (M. aspalax - M. armandii M. smithii - M. rufescens) 0.08 0.062- 0.07
between two forms of M. psilurus 0.08 0.063
between distant species (Myospalax Eospalax) 0.25-0.35 0.154-0.226
between genera (Myospalax Spalax) 0.31 0.238-0.304
19Conclusions
- Our results didn't confirm the hypothesis of
validity of the genus Eospalax suggested by Zhou
and Zhou (2009). The all studied zokor species
should be divided into 3 species groups within
one genus Myospalax "myospalax",
"psilurus-armandii-aspalax" and
"smithii-cansus-rufescens". - The species within the "psilurus-armandii-aspalax"
(M. psilurus, M. armandii, M. aspalax) as well
as within "smithii-cansus-rufescens" (M. smithii,
M. cansus, M. rufescens) groups were closely
related among themselves. The M. myospalax,
differs from the other species in chromosomal and
molecular features, is more closely related with
the first species group than the second one. - The hypothesis of species status of M. aspalax
suggested on craniometrical analysis of zokors
were confirmed (Puzachenko et al., 2009). - The hypothesis about the independent species
status of two geographical populations of M.
psilurus from Khanka Plain and Transbaikalia
earlier suggested on t biochemical and
karyological data (Pavlenko, Korablev, 2003) was
also confirmed on the results of mt DNA analysis
.
20The Authors
Marina Pavlenko
Marina Tsvirka
Vladimir Korablev
Junfeng Pang
21ACKNOWLEDGMENTS
The study was supported by the RFBR (grant nos.
06-04-39015) and FEBRAS (grant nos. s
09-III-?-138).
THANKS FOR YOUR ATTENTION