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Respective contributions of MIAME, GeneOntology and UMLS for transcriptome analysis Fouzia Moussouni, Anita Burgun, Franck Le Duff, Emilie Gu rin, Olivier Lor al
... mandatory descriptive information as previously described ... Study Design. Login. Biomaterials (samples, treatments) New. User Registration. Logical Flow ...
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Review of microarray technology from data/database perspective ... 'An observed phenotype is specific for ... Rosetta Resolver (www.rosettabio.com) OpenSource ...
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Alvis Brazma, Helen Parkinson, Ugis Sarkans, Mohammadreza ... Support on ontologies and CVs. Minimize free text, removal of synonyms. MIAME encouragement ...
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Intro to the Clinical Research Chart (CRC) Hive / Cell Software Architecture ... Complex encoding; e.g., encoding MIAME in MAGE. Microarray data normalization ...
Ontology concepts derived from the MIAME guidelines/MAGE-OM ... A Functional Genomics Object Model (FGE-OM) ... ideas from SysBio-OM (Xirasgur et al. ...
The MIAME (Minimum Information About a Microarray Experiment) ... Select the find 3 closest genes' option. IER2, FOS, JUN, have similar expression to nfkbia. ...
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MGED Ontology (MO) A resource for creation of MAGE-ML documents that are MIAME Compliant ... for translation between MAGE & MO. EBI ArrayExpress has plans for ...
Many tourists go there for shopping because everything is so cheap. In the middle of the ... Das beliebteste Ferienziel ist Miami. Ich lebte drei Jahre dort. ...
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Data specification for describing experiments in the domain of ... Osmoregulation in Flounder. Environmental Genomics. Thematic Programme. Data Centre ...
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(open source, Java) Hancock D, Wilson M, Velarde G, Morrison N, Hayes A, Hulme H, Wood JA, ... Easy to install and maintain. Tools for biologists, tools for developers ...
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In order to properly share data among the NIDDK SCGAP consortium groups we agreed to: ... that the minimum information that a researcher at a different lab needs to ...
Split up the problem among people. Post questions to the mailing list ... Create a spreadsheet to plan the mapping. Separate by MAGE Package and Class ...
What we can contribute to FUGO. What we want from FUGO. What the challenges ... Norman Morrison work ... Norman Morrison became Env representive in RSBI, FUGO ...
Provide bridge to ontologies from other knowledge domains. What is an Ontology? ... Knowledge representation. Link to other domains (gene sequence annotation, ...
Write code to produce MAGE-ML from data in the database. Understanding MAGE-OM ... SMD documents detailing the process of mapping SMD to MAGE-OM, and the mappings ...
Rage. 419. 4,821,028. 496. Mad. 2,787. 34,921,560. 565. Cage. 70. 864,724. 60. Aged. Database Usage (Mb) ... Clones are related to Wells which are related to ...
MGED Ontology (MO) A resource for creation of MAGE-ML ... Not an ontology of life but of experiments. Parts are applicable to describing experiments in general ...