For a length of 1K background sequence, you can get about 1000-Matrix.length scores. ... Get more information about 13K sequences. Cache the threshold for 13K. ...
Extend function prediction through inclusion of structure ... Scored against Astral PDB90. 1.5% error rate in subfamily classification using top-scoring SHMM ...
... of annotation errors in a database of protein sequences' Bioinformatics 2002 ... molecular function: advances and challenges,' Bioinformatics 2004 (20)2:170-179 ...