Title: Presentazione di PowerPoint
 1 Molecular recognition in 
protein-protein interactions 
advances in Differential Sedimentation FFF method  
Letizia Bregola, Catia Contado, Stefano Sforza1, 
Valeria Cavatorta1, Rosangela Marchelli1, 
Francesco Dondi   Department of Chemistry, 
University of Ferrara, Via Luigi Borsari 46, 
I-44100 Ferrara, I. E.mail letizia.bregola_at_unife.
it . Phone 39 0532 455155  Fax 39 0532 
240709 1Dipartimento di Chimica Organica e 
Industriale, V.le G.P. Usberti, 17/A - Campus 
Universitario - 43100 Parma. E.mail 
stefano.sforza_at_unipr.it. Phone 39 0521 905406
FFF Field-Flow Fractionation
Why this topic?
Field-Flow fractionation FFF is a group of 
separation techniques capable of fractionating 
and characterizing polymeric and particulate 
materials2. Sedimentation FFF is a high 
resolution technique for the characterization of 
colloidal particles and it is a sensitive method 
for measuring the mass of adsorbed layers 
3. Differntial FFF is a particular approach 
when an uptake adsorbed mass is determined by two 
independent FFF measurement, one over a species 
and the second over the same modified species.
The adsorption of proteins onto polymeric 
microsferes is important in numerous biomedical 
applications immunoassay tests and molecular 
recognition at the particle interface and hence 
has been studied from some viewpoints for the 
last two decades. The immune system produces at 
least five kinds of immunoglobulins (Ig) or 
antibody (IgA, IgD, IgE, IgG and IgM) but the 
principal one that partecipates in allergic 
reactions is immunoglobulin E (IgE) 1
Samples
 PS
antiIgE
IgE
-  Polystyrene Latex diameters nominal 0.384µm. 
- Conc. 2.5 w/v G. Kisker GbR 
- Density 1.047 g/ml 
- Goat anti Human IgE (Fc specific) 
- Conc. 2 mg/ml 
-  OEM Comcepts 
- IgE human polyclonal 
- Conc. 0.761 mg/ml 
-  Fitzgerald Inc. 
Preparation of coated particles
Aim  
(adsorption of human IgG onto PS)
The aim of this study is to use the Differential 
FFF as an high resolution analytical technique to 
detect the protein-surface and protein-protein 
interactions in particular to specific 
recognition of immunoglobulin E (IgE), produced 
by human body, by a specific human anti- IgEs 
that are attached to a PS (polystyrene) 
nanoparticles.
-  A solution of IgG 2 w/v in deionized water was 
 heated for 30 min at 58C.
-  In a Eppendorf tube, 825µL of a glycine buffered 
 saline at pH 9.4 (containing 0.15 w/v glycine
 and 0.2 w/v NaCl) was mixed with 75 µL of IgG
 solution.
-  100 µL portion the polystyrene suspension 10 
 w/v was added.
-  The tube was vortexed for three minutes and then 
 incubated for four hours at room temperature.
-  After the adsorption process, the coated 
 particles were centrifugated for 15 min and the
 supernatant was replaced with buffer solution.
-  This cleaning procedure was repeated six times. 
-  At this point the sample was ready for injection 
 into the SedFFF channel.
PS
coated 
uncoated 
-  Preparative step 
-  Protein adsorption on polystyrene 
 particlesPS-antiIgE
PS-antiIgE
Resp UV
d1
d
t (min)
Measurement of film mass by SedFFF
and
Protein-protein interaction
-  2 step study human serum. Specific interaction 
 PS-antiIgE-human IgE
-  1 step specific interaction PS-AntiIgE-IgE
Non allergic serum
Allergic serum
PS
PS-antiIgE
PS-antiIgE
Resp UV
PS-antiIgE-IgE
Resp UV
Human Serum (determination of serum IgE)
t (min)
t (min)
In the allergic response, the plasma cell 
produces IgE antibodies, in an allergic patient 
are high levels of IgE in the blood . Using the 
serum of this patient, we successfully detected 
IgE antibody directly.
The specific interaction AntiIgE-IgE proves that 
the antiIgE adsorption (1 step) occurs witout 
altering the antiIg reactivity. 
Conclusion 
References
This study shows that Differential SdFFF 
technique is able to detect the occurred 
interaction between the antibody serum IgE, 
produced to respond to allergic substances, and 
specific antiIgE (Fc specific). These 
interactions between immuno and 
antiimmuno-globulins are highly specific as 
proven by negative controlles performed with IgG 
and IgA.
1 D.Lane, E. Hallow, Antibodies A Laboratory 
Manual, CSHL Press (1988) 2 F.Dondi M.Martin 
Physicochemical measurements and distribution 
from Field-Flow Fractionation FFF Handbook 2000 
Chap.7,103 3 B. Langwost, K.D. Caldwell 
Chromatographia 1992 Vol.34,317