Title: CHEM 834: Computational Chemistry
1CHEM 834 Computational Chemistry
Quantum Chemical Methods 1
March 10, 2008
2Topics
last time
- overview of computational chemistry
- potential energy surfaces
today
- review of quantum mechanics
- Slater determinant wavefunctions
- Hartree-Fock calculations
- self-consistent solution of the Fock operator
3Quantum Chemical Methods
quantum chemical methods employ a quantum
mechanical treatment of the electrons without
resorting to parameterization
also called
- electronic structure methods
- molecular orbital calculations
What do we get from these calculations?
- electronic wavefunction ? contains all
information regarding the system
- can calculate electronic energy
- useful for exploring the potential energy surface
- needed to calculate reaction energies and barriers
- can describe changes in electronic structure/bonds
- can study changes in molecular orbitals
- can calculate other properties related to the
electronic structure
- can approximate quantities like atomic charges
and bond orders
4Quantum Mechanics Review
Classical Mechanics (Newton et al.)
- objects are treated as particles with
well-defined positions and momenta
- behaviour is governed by Newtons equations (or
equivalent)
F ma
- appropriate for objects ranging from atoms to
planets
Quantum Mechanics (Heisenberg, Schrödinger, et
al.)
- objects are described as probability distributions
- cannot know exactly a particles position and
momentum simultaneously
? Heisenberg uncertainty principle
- all information regarding the system is contained
in the wavefunction
? wavefunction obtained through Schrödinger
equation (or equivalent)
- needed to describe behaviour of small, light
particles (electrons, maybe protons)
5Postulates of Quantum Mechanics
- the state of a system is described by a function
?(r,t) called a wavefunction
Postulate 1
- ?(r,t) is single-valued, continuous,
quadratically integrable
- the probability that the particle is in volume d?
at position r and time t is
- since the particle must be somewhere all the time
d? indicates integration over all coordinates
indicates the complex conjugate of ?
bold fonts indicate vectors
e.g. r (x,y,z)
6Postulates of Quantum Mechanics
- the state of a system is described by a function
?(r,t) called a wavefunction
Postulate 1
- ?(r,t) is single-valued, continuous,
quadratically integrable
- the probability that the particle is in volume d?
at position r and time t is
- since the particle must be somewhere all the time
Postulate 2
- every physical observable is represented by a
linear Hermitian operator
7Linear Hermitian Operators
Operator
- a rule that turns a function into another function
- designated with a hat (sometimes Ill use
italics)
Linear Operator
- an operator with the following properties
Hermitian Operator
- an operator with the following property
- guarantees real values for associated property
8Postulates of Quantum Mechanics
Postulate 2
- every physical observable is represented by a
linear Hermitian operator
- quantum mechanical operators are analogues of
classical expressions using
- for example, consider the kinetic energy
9Postulates of Quantum Mechanics
- in any measurement of the observable associated
with operator B the only values that will ever be
observed are eigenvalues bi that satisfy
Postulate 3
eigenfunction of B
eigenvalue of B
- ?i is an eigenfunction of operator B if operating
on ?i with B gives back ?i multiplied by a
constant
- constant is called an eigenvalue, value of
property B when system is in state i
example
10Eigenvalues and Eigenfunctions
- eigenfunctions of Hermitian operators are
orthonormal
- basically says system is in state i or j, but not
both
- lets us calculate the eigenvalue for a given state
11Postulates of Quantum Mechanics
- in any measurement of the observable associated
with operator B the only values that will ever be
observed are eigenvalues bi that satisfy
Postulate 3
- this postulate introduces notion of discretized
states, which is at the heart of quantum mechanics
Postulate 4
- an arbitrary state ? can be represented as a
linear combination of the eigenfunctions of a
quantum mechanical operator
- called superposition principle
- system must adopt a specific state upon
measurement
12Postulates of Quantum Mechanics
- the average value of property B at time t is
Postulate 5
- time development of a state is given by the
time-dependent Schrödinger equation
Postulate 6
- H is the Hamiltonian total energy operator
13Time-Independent Schrödinger Equation
for most chemical problems V is independent of
time
usually Coulomb potential
- energy of state specified by ? is constant at all
times
- ?(r) is the solution to the time-independent
Schrödinger equation
time-independent Hamiltonian
time-independent wavefunction
14Summary of Quantum Mechanics
solving the time-independent Schrodinger equation
gives us the energy and wavefunction
- the wavefunction contains all the information
that can be known for the system
- there is a different wavefunction for each state
- wavefunctions are orthonormal
- the square of the wavefunction is interpreted as
a probability
- P(r1) is the probability of finding the electron
in volume element dr1 at position r1
15Summary of Quantum Mechanics
we calculate properties by operating on
wavefunctions
- operators are analogues of classical expressions
for properties
- the values of the properties are eigenvalues of
the operators
- the wavefunction is an eigenfunction of the
operator
- the value of a property for a specific state is
any wavefunction can be expressed as a linear
combination of eigenfunctions of any quantum
mechanical operator
- this mathematical property will be useful when we
develop quantum chemical methods
16Molecular Hamiltonian
quantum chemical methods strive to solve the
time-independent Schrödinger equation
for a system of N electrons in the presence of M
nuclei using only mathematical approximations
? no parameterization/fitting to experimental
data
2 nuclei, 2 electrons
terms included in the Hamiltonian
1 electron-electron interaction
1 nucleus-nucleus interaction
4 nucleus-electron interactions
kinetic energy of electrons and nuclei
17Molecular Hamiltonian
2 nuclei, 2 electrons
terms included in the Hamiltonian
1 electron-electron interaction
1 nucleus-nucleus interaction
4 nucleus-electron interactions
kinetic energy of electrons and nuclei
simplifications
1. Born-Oppenheimer approximation
2. atomic units
18Born-Oppenheimer Approximation
- nuclei are much heavier than electrons
? mproton 2000 melectron
? nuclei move much more slowly
? consider electrons as moving in field of fixed
nuclei
? nuclear kinetic energy can neglected
? nuclear-nuclear repulsion energy is constant
19Born-Oppenheimer Approximation
- solution to Schrodinger equation for electronic
Hamiltonian
- is the electronic wavefunction
- depends explicitly on electronic coordinates, ri,
and parametrically on the nuclear coordinates, RI
- total energy also depends parametrically on RI
- relationship between Etot and RI yields the
potential energy surface
20Atomic Units
simplify by changing units
distance a0 bohr radius 5.2918 x 10-11 m
energy Hartree 4.3598 x 10-18 J 627.51
kcal/mol
21Quantum Chemical Methods
we want to calculate the total molecular energy
using
where Htot is
since the last term is a constant, we really need
to solve
where Helec is
- will give us the electronic energy
- will give us the electronic wavefunction ? used
to get other properties
22Quantum Chemical Methods
it is not possible to solve the Schrodinger
equation exactly for a many-body system
electron-electron terms are the problem
called the many-body problem
- the motion of electron 1 affects the motion of
electron 2, and vice-versa
- prevents separability of the Hamiltonian
- means we cant break down the Hamiltonian into
independent equations for electrons 1 and 2
- many-body problem is not unique to quantum
mechanics and electrons
- the sun-moon-earth system cannot be described
rigorously with classical mechanics because of
many-body effects
23Quantum Chemical Methods
it is not possible to solve the Schrodinger
equation exactly for a many-body system
electron-electron terms are the problem
Strategies used in quantum chemistry
1. treat electron-electron interactions as a
minor perturbation
- called perturbation theory
2. guess a suitable form of ? and optimize it
- called variational method
- basis for most of quantum chemistry
24Variational Method
Example for the Hydrogen atom
25Variational Method
Example for the Hydrogen atom
we want to pick ? to give the best agreement with
the real solution
Obvious questions
1. can we really do this?
2. how do we optimize ? (i.e. how do we pick
?)?
3. what form of ? should we use?
26Variational Principle Some Background
there exists an infinite set of wavefunctions,
??, such that
where the energies E? are the eigenvalues for a
particular state
since the wavefunctions are orthonormal
27Variational Principle Some Background
energy of a specific state
- we cant solve this because we dont know what ?j
is
variational approach (basic idea)
- lets take a guess at the form of ?j and try to
get as close as possible to the real wavefunction
- trial wavefunction must meet certain constraints
to be valid
4th postulate of quantum mechanics
- an arbitrary wavefunction can be expressed as a
linear combination of the set ?i
28Variational Principle Some Background
trial wavefunction
- choose ? to be orthonormal
- dont know exact form of ?i
29Variational Principle Some Background
trial wavefunction
- choose ? to be orthonormal
- dont know exact form of ?i
30Variational Principle Some Background
what we know
compare the trial energy with the ground state
31Variational Principle Some Background
what we know
compare the trial energy with the ground state
32Variational Principle Some Background
what we know
compare the trial energy with the ground state
and with some rearrangement
- this is called the variational integral
33Variational Principle
energy of trial function, ?
true ground state energy of the system
normalization factor
for any suitable trial wavefunction
- the energy of the trial function is guaranteed to
be higher than the real ground state energy
- if we happen upon the real wavefunction we get E0
- otherwise, we get an upper bound on E0
trial wavefunction with lower energy is a
better trial wavefunction
34Construction and Optimization of Trial
Wavefunctions
nice concept, but how do we use it?
Linear variation
- pick a trial function that is a linear
combination of basis functions
well-defined functions
coefficients in linear expansion
- modify coefficients ai to minimize the energy
the best trial wavefunction gives the lowest
energy
35Construction and Optimization of Trial
Wavefunctions
trial function is a linear combination of basis
functions
Back to the Hydrogen atom
a single gaussian function is not a good trial
wavefunction!!!
a11.0, ?10.5
36Construction and Optimization of Trial
Wavefunctions
trial function is a linear combination of basis
functions
Back to the Hydrogen atom
a linear combination of gaussian functions is a
good trial wavefunction!!!
a10.1, ?13.5
a20.5, ?20.6
a30.4, ?30.2
optimized to minimize energy
fixed to define the basis function
37Linear Variation
the best trial wavefunction minimizes the energy
to optimize ?, we need a relationship between E
and ai
in compact notation
38Linear Variation
- energy of the trial wavefunction
? lower energy better wavefunction
- Hij and Sij are constants
Minimization
- minima are stationary points
this is like a geometry optimization on the
potential energy surface, but instead of
coordinates, we have coefficients
39Secular Equations
Working out the derivatives
- ais define ? with energy E
- to solve, we need E first
- get E from secular determinant
40Secular Determinant
Secular determinant
- polynomial of order N with N roots
- analogous to how ax2 bx c 0 gives 2 roots
- roots correspond to energies
- E0 ? E1 ? E2 ? E3 ? E4 ? EN-1
- can be shown that each Ej is an upper bound on
the real energy of state j
- the Ejs can be used to get a set of ais for
each state by solving the secular equations
41Secular Equations
we can get N trial wavefunctions from N basis
functions
E0, E1, E2, ,EN-1
42Linear Variation - Summary
Procedure
2. evaluate Hij and Sij
3. construct secular determinant and solve for
Ej
4. solve
for each Ej
Results
set of coefficients ai for each state j that
give lowest energy for a specific trial
wavefunction
Note
- more basis functions, ?i, gives more coefficients
to tweak
- leads to a lower energy, and better wavefunction
43Variational Method
Example for the Hydrogen atom
we want to pick ? to give the best agreement with
the real solution
Obvious questions
1. can we really do this? ? variational principle
2. how do we optimize ? (i.e. how do we pick
?)? ? linear variation method
3. what form of ? should we use?
44Trial Wavefunctions
how do we select a trial wavefunction for
molecules?
1. Assumptions
- each electron occupies a molecular orbital
(analogous to atomic orbitals)
- molecular orbitals are orthonormal
2. Constraints
- trial wavefunction must satisfy Pauli exclusion
principle
- trial wavefunction must be antisymmetric
- trial wavefunction must not distinguish between
electrons
45Molecular Orbitals
in atoms
- each electron occupies 1 atomic orbital
e.g. 1s, 2s, 2pz,
- atomic orbitals are centered on nucleus
- atomic orbitals are orthonormal
in molecules
- each electron occupies 1 molecular orbital
- molecular orbitals can be delocalized across all
atoms
- molecular orbitals are orthonormal
C-C ?-bond in ethene
C-C ?-bond in ethene
46Molecular Orbitals
molecular orbitals depend on spatial coordinates
and spin
Spatial orbital, ?i(r)
- function of the position vector, r
- describes the spatial distribution of the
electron
Spin functions
- Helec does not include spin ? would need a
relativistic treatment to get spin
- artificially introduce orthonormal spin
functions g(?) ?(?) or ?(?)
- ? represent spin coordinates
47Molecular Orbitals
molecular orbitals depend on spatial coordinates
and spin
Spin orbital, ?i(x)
- spin orbitals are used in quantum chemical
calculations
- treatment of spin increases the number of degrees
of freedom
spin coordinates
spatial coordinates
- for a system with N electrons, there are 4N
degrees of freedom
48Constraints on the Trial Wavefunction
for variational principle to apply, the trial
wavefunction must satisfy the same constraints as
the real wavefunction
1. Pauli exclusion principle
- for atoms ? no two electrons can have same set of
quantum numbers
- for molecules ? no two electrons can be in same
state
? no two electrons can have same xi
2. Antisymmetry
- ? must be antisymmetric with respect to
interchange of coordinates x between two electrons
- if ? is antisymmetric, the Pauli exclusion
principle will be satisfied
3. Indistinguishability
- uncertainty principle ? we cant know exact
positions and velocities of electrons
- ? must not distinguish between particles
49Molecular Orbitals ? Trial Wavefunction
we want the form of the trial wavefunction to
closely resemble the true wavefunction
cannot treat electron-electron terms exactly
lets forget about e-e interactions for now
solve Schrödinger equation
solution is product of molecular orbitals
50Hartree Product
- appealing because it is simple from a
mathematical standpoint
Hartree product is an independent-electron
wavefunction
- probability that electron 1 is in dx1 is
independent of probability that electron 2 is in
dx2, etc.
51Hartree Product
consider flipping 2 coins
probability of both coins landing heads up
probability of coin 1 being heads
probability of coin 2 being heads
if a probability can be written as a product of
probabilities of individual events, those events
are independent of each other
consider a 2 electron example
probability electron 1 is in dx1 at x1 and
electron 2 is in dx2 at x2
probability electron 1 is in dx1 at x1
probability electron 2 is in dx2 at x2
52Hartree Product
- appealing because it is simple from a
mathematical standpoint
Hartree product is an independent-electron
wavefunction
- probability that electron 1 is in dx1 is
independent of probability that electron 2 is in
dx2, etc.
- in reality the motion of electron 1 should depend
on the motion of all the other electrons ?
electron correlation (more later)
implications
- Hartree product neglects instantaneous
electron-electron interactions
- for an N electron system, electron 1 feels the
average Coulomb repulsion of the other N-1
electrons
53Hartree Product
Coulomb energy
point charges at r1 and r2
Q1(r1)
Q2(r2)
54Hartree Product
Coulomb energy
Q2 induces a potential at r1
r1
Coulomb potential
Q2(r2)
Q3(r3)
- electrostatic potential at r1 due to a point
charge at r2
Q5(r5)
Q4(r4)
55Hartree Product
electrons are not point charges, but instead are
charge distributions
consider a two-electron system
- charge in dr2 at r2 from the electron in ?2
r1
- the potential at point r1 from the charge in dr2
at r2 from the electron in ?2 is
charge cloud of electron in ?2
- but the electron is spread over all values of r2
- for continuous values of r2, the sum becomes an
integral
56Hartree Product
bring in the second electron
- charge in dr1 at r1 from the electron in ?1
- the Coulomb repulsion the electron in ?1
experiences in dr1 at r1 is
charge cloud of electrons in ?1 and ?2
- integrating over all values of r1 gives the total
electron-electron Coulomb energy
57Hartree Product
for an N electron system
- the Coulomb potential the electron in ?i feels in
dr1 at r1 is
- this is simply the electrostatic repulsion from
the other N-1 electrons in the system
- since the electron distributions are independent,
this represents the average electrostatic
potential ? instantaneous electron-electron
repulsion is not considered
Hartree product wavefunction treats each electron
as moving in the average field of the other N-1
electrons in the system!!!
- significant limitation because electrons do
interact instantaneously
- but, not a surprising result because the Hartree
product is the solution of the Hamiltonian
without any electron-electron interactions
58Hartree Product
lets test ?HP against the criteria for a valid
wavefunction
1. Indistinguishabilty
- distinguishes between electrons
- invalid form of wavefunction
2. Antisymmetry
- invalid form of wavefunction
59Slater Determinant Wavefunction
deficiencies of ?HP can be overcome by taking
linear combinations of product wavefunctions
1. Indistinguishabilty
- does not distinguish between electrons
- electron 1 can be found in either orbital
- electron 2 can be found in either orbital
- valid form of wavefunction
2. Antisymmetry
- valid form of wavefunction
60Slater Determinant Wavefunction
?12 is a Slater determinant
normalization constant
determinant
Determinants
- lines on left and right (dont confuse with
matrices that use brackets)
- functions as a shorthand for writing the sum of
products
61Slater Determinant Wavefunction
Properties of Determinants (D)
1. if all elements in a column or row are 0, D 0
2. multiplying a row or column by k multiplies D
by k
3. switching two columns or two rows changes the
sign of D
4. if two columns or two rows are identical, D 0
5. if two columns or two rows are multiples of
each other, D 0
6. multiplying a column (or row) by k and adding
it to another column (or row) leaves D unchanged
62Slater Determinant Wavefunction
virtually all quantum chemical methods use Slater
determinants
For an N electron system
- columns labeled by molecular orbitals
- rows labeled by electrons
Based on properties of determinants
- switching two rows changes sign of ?SD ?
antisymmetry
- if two columns (molecular orbitals) are identical
?SD 0 ? two electrons cant occupy same orbital
(Pauli exclusion principle)
63Slater Determinant Wavefunction
Hartree product was an independent electron
wavefunction
what about Slater determinants?
consider two electron system with electrons of
opposite spin
square to get probability
define P(r1,r2)dr1dr2 probability of finding
electron 1 in dr1 and electron 2 in dr2
- probability is just products ? electrons of
opposite spin are independent with Slater
determinant
- in fact, P(r1,r1) ? 0 ? with Slater determinant
two electrons of opposite spin can occupy the
same point in space
64Slater Determinant Wavefunction
Hartree product was an independent electron
wavefunction
what about Slater determinants?
consider two electron system with electrons of
same spin
using analysis on preceding slide
- probability is not just products ? electrons of
same spin are correlated with Slater determinant
- called exchange correlation because last two
terms exchange electron coordinates between
different spatial orbitals
- consequence of antisymmetrizing the wavefunction,
and related to Pauli exclusion principle
- P(r1,r1) 0 ? with Slater determinant two
electrons of same spin cannot occupy the same
point in space
65Slater Determinant Wavefunction
For an N electron system
- columns labeled by molecular orbitals
- rows labeled by electrons
Physics captured
- electrons of opposite spin are treated
independently
? neglects instantaneous Coulomb interactions
- electrons of opposite spin are correlated through
exchange interactions
? accounts for Pauli exclusion principle
? significant improvement over Hartree product
66Hartree-Fock Calculations
Hartree-Fock calculations are the basis for
virtually all quantum chemical methods
- ab initio methods are built upon Hartree-Fock
calculations
- in practice, density functional theory
calculations look very much like Hartree-Fock
calculations
- semi-empirical molecular orbital methods involve
approximations with the framework of Hartree-Fock
theory
Other common names for Hartree-Fock calculations
- self-consistent field (SCF) calculations
- these names are technically incorrect, but you
may see them in the literature
- molecular orbital (MO) calculations
67Hartree-Fock Calculations
The basic idea of Hartree-Fock calculations
1. the full Hamiltonian within the
Born-Oppenheimer approximation
2. a trial wavefunction consisting of one Slater
determinant
3. molecular orbitals expressed as linear
combinations of basis functions
basis function with a fixed form
artificial spin function
coefficient in linear expansion (called molecular
orbital coefficients)
68Hartree-Fock Calculations
The basic idea of Hartree-Fock calculations
1. the full Hamiltonian within the
Born-Oppenheimer approximation
2. a trial wavefunction consisting of one Slater
determinant
3. molecular orbitals expressed as linear
combinations of basis functions
4. variational optimization of ? using the
molecular orbital coefficients as variational
parameters
69Linear Combination of Basis Functions
Hartree-Fock molecular orbitals are expressed as
linear combinations of basis functions
Basic motivation
- linear combination of atomic orbitals
- molecular orbitals are expressed as linear
combinations of atomic orbitals
- K atomic orbitals yields K molecular orbitals
H
H
- N molecular orbitals with lowest energy are
occupied and all others are called unoccupied
1sL
1sR
70Linear Combination of Basis Functions
Hartree-Fock molecular orbitals are expressed as
linear combinations of basis functions
basis functions other than atomic orbitals
- linear combination of atomic orbitals
- basis functions dont have to be atomic orbitals
- we can choose any suitable well-defined
mathematical function
- well discuss basis functions more in a later
lecture
atomic orbital basis set
alternative basis set
- still mathematically valid
C
H
71Hartree-Fock Energy
to use the variational method, we need a
relationship between the energy and the MO
coefficients
for any normalized wavefunction
in Hartree-Fock theory
and if you work it out, the energy becomes
72Hartree-Fock Energy
to use the variational method, we need a
relationship between the energy and the MO
coefficients
recall that molecular orbitals are linear
combinations of basis functions
so, now we have a direct relationship between the
Hartree-Fock energy and molecular orbital
coefficients
- later, well look at how to variationally
optimize the MO coefficients
- now, lets look at the energy expression itself
73Hartree-Fock Energy
in terms of the MOs, the Hartree-Fock energy is
or in standard short-hand notation
exchange integral
Coulomb integral
one electron energy
two electron energy
74One Electron Energy
same molecular orbital
details
- involves only 1 molecular orbital ? one-electron
energy
75One Electron Energy
kinetic energy of electron in ?a
Coulombic attraction between M nuclei and
electron in ?a
details
- involves only 1 molecular orbital ? one-electron
energy
- electronic kinetic energy
- nuclear-electron Coulombic attraction
- must sum over all electrons in the system
76Coulomb Integral
two different molecular orbitals
details
- involves 2 molecular orbitals
- called a two-electron integral
- have to sum over all pairs of electrons to get
total energy
77Coulomb Integral
probability of finding electron a in dx1
details
- involves 2 molecular orbitals
- called a two-electron integral
- have to sum over all pairs of electrons to get
total energy
- represents Coulomb interaction between two charge
clouds representing the electrons in molecular
orbitals a and b
- probability of finding electron a in dx1 is
independent of finding electron b in dx2
- accounts for electrostatic energy resulting from
electron a moving in average field of electron b
- Jab is non-zero even when x1 x2
- electrons can exist at same point in space
- violates Pauli exclusion principle for electrons
of same spin
78Exchange Integral
two different molecular orbitals
details
- involves 2 molecular orbitals
- called a two-electron integral
- have to sum over all pairs of electrons to get
total energy
- exchanges coordinates of electrons in molecular
orbitals a and b
- does not have a simple classical analogue like
Coulomb integral
- accounts for exchange energy (Pauli repulsion
between electrons)
- consequence of using antisymmetric wavefunction
- is only non-zero for electrons of the same spin
- Pauli repulsion doesnt affect electrons of
opposite spins
- cancels out Coulomb energy arising from two
electrons with the same spin being at the same
point in space
79Two Electron Energy
sum over all pairs of electrons
- prefactor of ½ prevents double-counting of
interactions
Jab has a positive sign
- Coulomb interaction between electrons is repulsive
Kab has a negative sign
- exchange interactions make electrons of the same
spin avoid each other
- Jab does not account for this correlation,
overestimates repulsive energy
- -Kab removes this overestimation by reducing the
energy
Jaa Kaa
- Jaa is the interaction of an electron with itself
- Kaa cancels out exactly this spurious interaction
80Hartree-Fock Energy
Hartree-Fock energy captures
- kinetic energy of electrons
- nuclear-electron attraction
- electron-electron Coulomb repulsion
- this interaction is treated in an average sense
- instantaneous electron-electron Coulomb
interactions are not considered
- accounts for Pauli repulsion/exclusion principle
- electrons of the same spin avoid each other ?
decrease in Coulomb repulsion
All of these quantities are approximate because
the wavefunction has an approximate form!!!!
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