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From National Checklist to Chinese Virtual Herbarium CVH

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Title: From National Checklist to Chinese Virtual Herbarium CVH


1
From National Checklist to Chinese Virtual
Herbarium (CVH)
  • Ma Keping, Qin Haining, Wang Lisong
  • Institute of Botany, the Chinese Academy of
    Sciences

TDWG 2007 Annual Conference, Bratislava
2
China is one of the most focusing area for its
mega-biodiversity in the world
Myers, N., Mittermeier, R. A., Mittermeier, C.
G., Fonseca, G. A. B. d. Kent4, J. 2000.
Biodiversity hotspots for conservation
priorities. Nature 403(853-858).
Kier, G., Mutke, J., Dinerstein, E., Ricketts, T.
H., Kuper, W., Kreft, H. Barthlott, W. 2005.
Global patterns of plant diversity and floristic
knowledge. Journal of Biogeography 32(7)
1107-1116.
Barthlott, W., Mutke, J., Rafiqpoor, M. D., Kier,
G. Kreft, H. 2005. Global centres of vascular
plant diversity. Nova Acta Leopoldina 92 61-83.
3
The worlds largest Flora completed
  • Initiated in 1930s and began in 1958
  • The last volume was completed on 2004
  • 45 years of extraordinary effort by 312 Chinese
    botanists
  • 126 books, which constitute 80 volumes
  • 31,141 species, 3407 genera, and 300 families of
    vascular plants
  • Flora Reipublicae Popularis Sinicae (FRPS)

4
Species of seed plants endemic to China
5
Herbaria and specimens in China
  • 318 registered herbaria in China ca. 16,135,547
    specimens
  • Only 17 participated herbaria with ca. 4,000,000
    (24.79) specimens have been digitized and ca.
    2,700,000 (16.73) have been put on-line in
    present CVH

6
Goals
  • Integration of the fragmented inventory and
    primary plants biodiversity data
  • Providing web-based services to users through
    standard information technology
  • Providing necessary information for
    decision-maker in doing conservation actions in
    China

7
The major data groups in present CVH
8
Two focusing parts at present CVH
  • the Catalog of Life, China Plants
  • the Virtual Herbarium

9
Names and taxa of vascular plants in China
10
Species2000 China nodehttp//www.sp2000.cn/joaen/

Coming soon, until the end of this year
11
Chinese Virtual Herbarium-CVHhttp//www.cvh.org.c
n
  • Specimens
  • Species card
  • Gallery
  • Chinese Moss/Fern
  • E-library
  • Scientific Education

12
Specimen query Ginkgo biloba L.
13
Each species has been linked with FRPS
14
Specimen in details
15
Photos linked to species entry
16
Tools of data entry
17
Digitization of herbarium specimen
18
Type Specimen
19
Type Specimens
Cycas debaoensis Y. C. Zhong et C. J. Chen
20
Type specimen and protologue

21
Index of Chinese herbaria
22
Chinese moss and fern
23
Online magazine-History of plant collection in
China
24
Synopsis for Plant Taxonomical
literatures(1949-1990)
25
Gazetteer Database
26
Electronic Local Floras
  • Flora of Tibet
  • Flora of Qinghai
  • Flora of Qinling (Mt.)
  • Flora of Hainan
  • Flora of Sichuan

27
Scientific Education
28
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29
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30
Lessons from past
  • Standard is first!
  • Data standard Scientific name, Gazetteer,
    Collector
  • Information standard ABCD, TCS, SDD, DwC

31
What we will do?
  • Unified and flexible data tools for data provider
  • Involving with more Chinese herbaria and data
    provider
  • Re-organize content in the ways of consistent
    with standard web structure
  • Integration of the separated database
  • Optimize database structure as it consistent with
    TDWG standard
  • Geo-reference, and GIS-based distribution map
  • English interface for users
  • So many schedules and details we need to pay more
    attention, just mention a few of them

32
Standardization of Chinese gazetteer
33
Ecological niche modelingPotential distribution
of Rhododendron L.
Threatened species
Endemic species
34
Integration of separated databases
  • Chinese orchids
  • Chinese Virtual Paleobotanical herbarium (CVPH)
  • Digital Network of Chinese Natural Reserve

35
Distributed network of future CVH
36
Our experiences
  • CVH is the first biodiversity informatics project
    with the aim to integrate fragmented biodiversity
    data together and to provide a web-based services
    to users
  • Three years is not enough for it becoming a real
    mature information system
  • So many experiences for the first time
  • We still have a long way to go

37
Thank you
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