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Using DS Disposition

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Typically, 'So SDTM has a disposition dataset. ... disposition (EOS) visit 12, early term. So ... DSCAT DISPOSITION EVENT, PROTOCOL MILESTONE, or OTHER EVENT ... – PowerPoint PPT presentation

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Title: Using DS Disposition


1
Using DS- Disposition
  • One Key to Good SDTM Adoption
  • By J.J. Hantsch

2
DS - Concept
  • Disposition the act or power of disposing or
    the state of being disposed as final arrangement,
    transferal.

3
Typically,
  • So SDTM has a disposition dataset . . .
  • Hmmh, . . . final arrangement.
  • Typical reading
  • Disposition end of study
  • Typical idea
  • I have an EOS dataset Ill just convert that.

4
BUT,
  • RTFM

5
SDTM IG V3.1.2
  • . . . include protocol milestones, such as
    randomization, as well as subjects completion
    status or reason for discontinuation for the
    entire study or each phase or segment of the
    study, including screening and post-treatment
    follow-up. . .

6
Which means?
7
  • Start with a schedule of events
  • Mark each milestone
  • screening
  • randomization
  • each treatment change
  • end of dosing
  • any follow-up events
  • disposition (EOS)

8
For example, I (a study schedule)
  • Screening Visit 1
  • Randomization visit Visit 2
  • Run-in dosing one Visit 3
  • Run-in dosing two Visit 4
  • Experimental dose 1A Visit 5
  • Experimental dose 1B Visit 6
  • Experimental dose 1C Visit 7
  • Wash-out Period Visit 8
  • Experimental dose 2A Visit 9
  • Experimental dose 2B Visit 10
  • Experimental dose 2C Visit11
  • Follow-Up Visit Visit 12

9
Marking the study schedule
  • Screening Visit 1
  • Randomization visit Visit 2
  • Run-in dosing one Visit 3
  • Run-in dosing two Visit 4
  • Experimental dose 1A Visit 5
  • Experimental dose 1B Visit 6
  • Experimental dose 1C Visit 7
  • Wash-out Period Visit 8
  • Experimental dose 2A Visit 9
  • Experimental dose 2B Visit 10
  • Experimental dose 2C Visit 11
  • Follow-Up Visit Visit 12

10
  • Mark each milestone
  • screening visit 1
  • randomization visit 2
  • each treatment change visits 3, 5, 8, 9
  • disposition (EOS) visit 12, early
    term

11
So 7 records?
  • Completing subjects will have seven (7) unique
    records in the DS dataset.
  • One record per protocol milestone per subject
  • Fewer for Screen Failures, Refused Consenters or
    Early Terminators

12
DS Required Variables
  • STUDYID
  • DOMAIN
  • USUBJID
  • DSSEQ
  • DSTERM
  • DSDECOD
  • DSCAT
  • DSSTDTC

13
Required Variables (2)
  • STUDYID study identifier
  • DOMAIN DS
  • USUBJID subject identifier
  • DSSEQ a sequence number

14
Required Variables (3)
  • DSTERM verbatim name of event or protocol
    milestone
  • DSDECOD controlled term for event or protocol
    milestone
  • DSCAT DISPOSITION EVENT, PROTOCOL MILESTONE, or
    OTHER EVENT
  • DSSTDTC Start date/time of event

15
Example
  • STUDYID USUBJID DSSEQ DSTERM DSDECOD DSCAT
    DSSTDTC
  • BOB-101 B101-001 1 Screening SCREEN
    Protocol Milestone 10-22-07
  • BOB-101 B101-002 1 Screening SCREEN
    Protocol Milestone 10-22-07
  • BOB-101 B101-003 1 Screening SCREEN
    Protocol Milestone 10-23-07
  • BOB-101 B101-004 1 Screening SCREEN
    Protocol Milestone 10-24-07
  • BOB-101 B101-005 1 Screening SCREEN
    Protocol Milestone 10-25-07
  • BOB-101 B101-001 2 Randomization
    RANDOM Protocol Milestone 10-29-07
  • BOB-101 B101-003 2 Randomization
    RANDOM Protocol Milestone 10-30-07
  • BOB-101 B101-006 1 Screening
    SCREEN Protocol Milestone 10-31-07
  • BOB-101 B101-002 2 Early Termin
    ERLYTRM Disposition Event 10-31-07

16
GREAT!!
  • Now what?

17
Would you like this?
  • Dear Clinical Operations,
  • If I could provide you with a list of the
    status of all of the subjects in each of your
    clinical trials, broken out by updated (changed)
    status and totals for each milestone attained in
    the clinical trial, each time when I receive a
    refreshed source dataset, would you like that?
  • Your Programmer,

18
What does that mean?
  • A simple report
  • Run once each time you receive data
  • For each study
  • Each Milestone
  • Contrast Total and New

19
Study BOB-101
Report Date 25 Dec 2007
Report Prepared by J.J. Hantsch
Status CURRENT
20
Programming Needs
  • Sort the new dataset
  • Keep the previous versions dataset
  • Compare to new dataset
  • Create Flag variable for new milestone
  • Use Proc Freq or Tabulate
  • Tabulate results
  • Save most recent as old

21
Embellishments
  • Email the report to clinical people
  • Put totals on the far left
  • For Blackbarristers (Blackberry users)
  • Double Report
  • Summary
  • Cross by treatment
  • Throw in Percentages()

22
Dont Forget
  • Display the Date PROMINENTLY
  • Identify the Study (Studies)
  • Think ISS/ ISE
  • Identify CURRENT or COMPLETE
  • Identify Yourself

23
The Result
24
?
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