A Sample GbrowseMoby BioMoby Browsing Session

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A Sample Gbrowse-Moby BioMoby Browsing Session

• Start with a keyword apetala3, and limit the
  search to only those services offered by MIPS.
• Get EMBL Accession numbers matching that keyword
• Retrieve FASTA about the selected accession
  number
• Use that FASTA to do a BLAST search against the
  Snapdragon (Antirrhinum) database
• Extract the hit Antirrhinum sequence accession
  numbers from the selected Blast report
• Get the Snapdragon Locus IDs associated with the
  selected sequence identifier.
• Retrieve the list of Alleles for that Locus
• Retrieve the mutant images for the selected
  Allele
• Retrieve the SCUFL document describing the
  workflow that you just browsed through, that
  can be loaded into e.g. the Taverna software.
• The final slide shows a visualization of that
  workflow as displayed by the Taverna software.

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This is SCUFL Simple ConceptualUnified Flow
Language It is a complete record of everything
you just did, and it can be saved for use in the
Taverna workflow application that we will look at
later
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