UCSF Chimera Workshop, Fall 2005

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UCSF Chimera Workshop, Fall 2005
Conrad Huang

• Resource for Biocomputing, Visualization, and
  Informatics
• University of California at San Francisco

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Overview

• General format
• Short presentation/demonstration
• Hands-on tutorial
• Topics may be domain-specific
• Attend the topics of interest

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Todays Agenda
Time Topic Presenter
900-1045 Introduction to UCSF Chimera Eric
1045-1100 Break
1100-1200 Exploring sequence-structure relationships with MultAlignViewer Elaine
1200-130 Lunch
130-215 Screening docked ligands using ViewDock Elaine
215-315 MD Trajectories and structural ensembles Eric
315-345 Break
345-430 Displaying, defining and calculating attributes Conrad
430-530 General lab Team
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Tomorrows Agenda
Time Topic Presenter
900-1000 Large molecular assemblies Tom
1000-1030 Break
1030-1130 Volume data Tom
1130-100 Lunch
100-200 Producing images and movies Greg
200-300 Chimera scripts and demos Greg
300-330 Break
330-?? Panel discussion Team
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Todays Presenters

• Conrad Huang Chimera Developer
• Eric Pettersen Chimera Developer
• Elaine Meng Scientific Advisor
• Tom Goddard Chimera Developer
• Greg Couch Chimera Developer
• Scooter Morris Executive Director, RBVI

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Acknowledgements

• Staff
• Dr. Tom Ferrin, Dr. Conrad Huang, Tom Goddard,
  Greg Couch, Eric Pettersen, Dan Greenblatt, Al
  Conde, Dr. Elaine Meng, Dr. John Scooter Morris
• Collaborators (partial list)
• Patricia Babbitt, UCSF
• Wah Chiu and Steven Ludtke, Baylor
• John Sedat and David Agard, UCSF
• David Konerding and Steven Brenner, UCB

• Funding
• NIH National Center for Research Resources
• grant P41-RR01081
• Further information
• www.cgl.ucsf.edu/chimera