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Test Method Validation

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Title: Test Method Validation


1
Dave Warshauer, Ph.D., D(ABMM) Deputy
Director Communicable Disease Division WSLH Phone
(608) 265-9115 E-mail warshadm_at_slh.wisc.edu
2
Review of Spring 2007 WLRN Educational Testing
Proficiency Exercise
  • May 2, 2007

3
WLRN Testing Proficiency Notification/Shipping
Exercises
  • Exercises provided twice a year subset of
    laboratories follow notification/shipping
    protocol
  • Purpose of exercises
  • Practice rule out testing
  • Identify gaps in emergency lab response system
  • Practice assess notification transport.
  • Participation in exercises is voluntary, not
    connected to any regulatory agencies
  • Individual results are shared only with the
    participating laboratory
  • Each exercise is followed by an audioconference

4
Spring 2007 WLRN Testing Proficiency Exercise
  • 2 samples sent to 118 labs
  • 102 reported test results (86)
  • 16 did not to participate
  • Sample BPE 07-1-1
  • Oligella urealytica
  • Sample BPE 07-1-2
  • Moraxella nonliquefaciens
  • Samples intended to simulate Brucella spp. in
    rule out testing

5
Results of Rule out Tests
6
Results of Rule out Tests (cont.)
7
Results of Rule out Tests
8
Results of Rule out Tests
9
Results of Rule out Tests
10
Results of Rule out Tests
11
Emergency Laboratory Response Exercise
Most participants notified WSLH of intended
referral Labs should notify WSLH 24/7 number per
Wisconsin Emergency Response Guide for Clinical
Laboratories protocol. -Found error in answering
service protocol now corrected
12
Emergency Laboratory Response Exercise
Most participants each year used Dunham Express
for transport to WSLH
13
Emergency Laboratory Response Exercise
Number of participants that used class 6.2
shipper for transport, only required if
classified as Category A
14
Emergency Laboratory Response Exercise
  • All 18 samples were triple-packaged.
  • 15 of 18 used Class 6.2 (Category A) shipper,
    But
  • All 18 attached Infectious Substance/UN2814
    label for Category A substances
  • Only 11 of laboratories attached a Dangerous
    Goods Form required for Category A substances in
    Commercial transport)
  • Only 9 attached an itemized list to the secondary
    container (required for all Category A shipments
    and Category B shipments if transported by air or
    USPS (not if transported by ground)

15
Emergency Laboratory Response Exercise
  • Only 14 of 18 laboratories attached the name and
    telephone number of a person knowledgeable
    about the shipment to the outer container.
    (required for all Category A and Category B
    shipments)
  • Only 15 of 18 laboratories included a
    requisition form with the sample

16
Thank you to all the participating laboratories!
  • Watch for WSLH audioconference reviewing the
    emergency response protocol in September.

17
REMIND/REFRESH/THINK
Brucella spp. Francisella tularensis Bacillus
anthracis Yersinia pestis Others
RARE ISOLATES IN THE CLINICAL LABORATORY
18
History of Brucella
  • 1886---Sir David Bruce isolates Brucella
  • Micrococcus melitensis
  • Malta fever
  • 1895---Bernhard Bang isolates B. abortus
  • Bacillus abortus
  • Bovine abortion
  • 1918---Alice Evans demonstrates close similarity
    of the two organisms
  • New genus proposed, Brucella,
  • 1929---B. suis described by Huddleston
  • Associated with aborted swine
  • 1950s---Two additional species described
  • B. ovis and B. neotomae
  • 1968---B. canis identified as a cause of canine
    abortion

19
Brucella species
From Wafa Al-Nassir, emedicine.com/topic248.htm
20
BRUCELLOSIS
  • A zoonotic disease caused by any of 4 Brucella
    sp. abortus, melitensis, suis, and canis
  • B. melitensis most common
  • A systemic infection characterized by an undulant
    fever pattern
  • Relatively rare in the U.S. with approximately
    120 cases/yr

21
  • Brucellosis in the U.S.,1930-1990
  • Public Health Success Story

1. National elimination program started
2. Strain 19 vaccine for cattle
3. Mandatory herd testing
4. Revitalization
22
MMWR vol. 54, no. 53, 2007
23
MMWR vol. 54, no. 53, 2007
24
TRANSMISSION
www.gsbs.utmb.edu/microbook/ch028.htm
25
TRANSMISSION
  • Unpasteurized dairy products
  • The most common mode of transmission
  • Direct skin contact
  • Occupational hazard for farmers, butchers,
    veterinarians, and laboratory personnel
  • Aerosols
  • Highly infectious (Infective Dose 10-100
    organisms)

26
Infectious Dose
Bacteria Dose Route of Inoculation F.
tularensis 10 inhalation C.
burnetii 10 inhalation M.
tuberculosis lt10 inhalation Brucella
spp. 10-100 inhalation S. typhi 105
ingestion F. tularensis 108
ingestion
27
Pathogenesis
  • Patterns of illness similar in all forms of
    infection
  • Brucella are intracellular organisms
  • Survive and multiply within mononuclear
    phagocytes
  • Become localized in reticuloendothelial system
    e.g. lymph nodes, liver, spleen, and bone marrow
  • Illness reflects distribution of macrophages in
    bone, joints, brain, liver, spleen, and lung
  • Abscesses and granulomas
  • LPS is the major determinant of virulence

28
Clinical ManifestationsAcute onset in 50 of
casesIncubation period of 5-60 days
Anorexia, asthenia,fatigue, weakness,
malaise Abdominal pain, constipation, diarrhea,
vomiting Anxiety, confusion, depression,
insomnia Paralysis, nuchal rigidity,
papilledema
From Wafa Al-Nassir, emedicine.com/topic248.htm
29
Treatment
  • Mortality 5 in untreated patients
  • Usually from CNS infection and endocarditis
  • Treatment
  • Adults---Combination of doxycycline plus an
    aminoglycoside for 4 weeks followed by
    doxycycline and rifampin for 6 weeks
  • Children---TMP-SMX plus rifampin 4-6 weeks

30
Diagnosis
  • Routine laboratory tests
  • WBC---usually normal or depressed
  • Anemia
  • Thrombocytopenia
  • Serology
  • Serum agglutination test (SAT) gold standard
  • B. abortus 1119 antigen
  • Reacts with antibodies to B. melitensis and B.
    suis
  • No single serum titer is diagnostic
  • Most cases gt1160
  • Acute and convalescent serum optimal for
    diagnosis
  • Decrease in titer indicates good response to
    therapy
  • Increase titer indicates relapse

31
Diagnosis
  • Culture
  • 15-70 isolation rate depending on methods used
    and specimens cultured

32
Brucella spp.Specimen Selection
  • Blood or bone marrow
  • Sources from which Brucellae are most often
    isolated
  • Tissue (spleen, liver)
  • Brucellae occasionally isolated

33
Laboratory Diagnosis of Brucellosis
34
J. Infect. Dis. 153 122-125 1986
35
CASTEÑADA BOTTLES
Proc. Soc. Exp. Biol. Med. 64 114-115 1947
36
RADIOMETRIC
Parameter Recovery Detection
Arnow et al.a 100 4-8 days
Kolman et al.b 60.0 14 days
aJAMA. 251 505-507 1984
bEur. J. Clin. Microbiol. Infect. Dis. 10
647-648 1991
37
ISOLATOR
Parameter Recovery Detection
Navas et al.a 100.0 3.1 days
Kolman et al.b 55.0 3.5 days
aDiagn. Microbiol. Infect. Dis. 16 79-81 1993
bEur. J. Clin. Microbiol. Infect. Dis. 10
647-648 1991
38
NON-RADIOMETRIC -- I
Parameter Recovery Detection
Navas et al.a 85.7 20.6 days
Yagupskyb 78.8 7 days
aDiagn. Microbiol. Infect. Dis. 16 79-81 1993
bJ. Clin. Microbiol. 32 1899-1901 1994
39
NON-RADIOMETRIC -- II
Parameter Recovery Detection
Yagupsky et al.a 95.0 3 days
Yagupskyb 78.8 7 days
aJ. Clin. Microbiol. 35 1382-1384 1997
bJ. Clin. Microbiol. 32 1899-1901 1994
40
CONTINUOUS vs. ISOLATOR
J. Clin. Microbiol. 35 1382-1384 1997
41
MEDIA
42
CELLULAR MORPHOLOGY
43
COLONY MORPHOLOGY
Slow growing resembles inoculum _at_ 24 hours
Tiny, white, convex, non-hemolytic, moist,
glistening at 48 hours
44
CONFUSION
45
MISIDENTIFICATION OF Brucella
Moraxella phenylpyruvica (API 20NE)
Haemophilus influenzae biotype IV (MicroScan HNID)
Clin. Infect. Dis. 17 1068-1069 1993
46
BENCH-TOP/HOOD-TOP REAGENTS
Unable to rule out Brucella species refer to
state public health laboratory for confirmation
47
LABORATORY ACQUISITION
Biosafety in Microbiological and Biomedical
Laboratories, 5th ed.
48
PRACTICES
Biosafety Level (BSL)-2 Standard microbiology
practice Limited access Biohazard warning
signs Sharps precautions Biosafety manual
defining decontamination, surveillance
BSL-3 BSL-2 practice Controlled
access Decontamination of all waste Baseline
serum Decontamination of laboratory clothing
before laundering
Biosafety in Microbiological and Biomedical
Laboratories, 5th ed.
49
1 BARRIERS SAFETY EQUIPMENT
BSL-2 Class I or II biological safety cabinet
for manipulations of agents that cause splashes
or aerosols of infectious materials Laboratory
coats gloves face protection as needed
BSL-3 Class I or II biological safety cabinet
for all open manipulations of agents Protective
laboratory clothing gloves respiratory protectio
n as needed
Biosafety in Microbiological and Biomedical
Laboratories, 5th ed.
50
FACILITIES (2 BARRIERS)
BSL-2 Open bench, sink required Autoclave
available
BSL-3 BSL-2 facilities Physical separation
from access corridors Self-closing, double-door
access Exhaust air not recirculated Negative
airflow into laboratory
Biosafety in Microbiological and Biomedical
Laboratories, 5th ed.
51
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52
SUSCEPTIBILITY TESTING
MIC method
BSL-3 practices
Gentamicin Tetracycline Streptomycin Doxycycline
Trimethoprim-sulfamethoxazole
? aminoglycoside, ? tetracycline MIC
for capnophilic strains
CLSI. M100-S17 136-137 2007
53
SEROLOGY
Standard tube agglutination (serum agglutination
test)
Standardized stable commercial B. abortus smooth
antigen Untreated dilutions of patient sera
2-mercaptoethanol Incubate 48 hours in 37C
water bath Endpoint is highest dilution with
complete clumping and resultant clearing of fluid
Am. J. Clin. Pathol. 24 496-498 1954
54
SEROLOGY
Standard tube agglutination (serum agglutination
test)
55
SEROLOGY
Standard tube agglutination (serum agglutination
test)
-- Cross-reactivity Francisella
tularensis Vibrio cholerae Yersinia
enterocolitica -- Rough B. canis antigen does
not precipitate with agglutinins from smooth
organisms
Rev. Infect. Dis. 13 359-372 1991
56
SEROLOGY
Standard tube agglutination (serum agglutination
test)
Enzyme immunoassay
57
BRUCELLA ENZYME IMMUNOASSAY
Clin. Infect. Dis. 14 131-140 1992
58
BRUCELLA ENZYME IMMUNOASSAY
89 persistently IgG
69 persistently IgA
26 persistently STA
25 persistently IgM
Clin. Infect. Dis. 14 131-140 1992
59
SEROLOGY
Standard tube agglutination (serum agglutination
test)
Enzyme immunoassay
Coombs test
Useful in diagnosis of chronic brucellosis Signs
and symptoms are vague and indefinite
Lancet. ii 1181-1183 1966
60
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61
SEROLOGY
Standard tube agglutination (serum agglutination
test)
Enzyme immunoassay
Coombs test
Rose Bengal test
62
ROSE BENGAL TEST
Rapid screening test performed on card or tile
Antigen is rose bengal-stained suspension of
smooth attenuated strain of B. abortus
Sometimes confirmed with complement fixation
63
SEROLOGY
Standard tube agglutination (serum agglutination
test)
Enzyme immunoassay
Coombs test
Rose Bengal test
Recent advances
64
18 kD CYTOPLASMIC ANTIGEN
J. Clin. Microbiol. 31 2141-2145 1993
65
DIPSTICK SEROLOGY
66
DIRECT DETECTION
Microscopy not sufficiently sensitive
No laboratory protocol for DFA
Molecular (back to Dr. Warshauer)
67
LRN Reference Laboratory Tests for Brucella spp.
Conventional culture and biochemical
identification PCR based identification Time-res
olved fluorescence Tbilisi phage susceptibility
test Slide agglutination Serological testing of
the suspected patient
68
Select Agent Reporting
  • Contact CDC by telephone
  • 404-498-2255
  • Within 7 days of identification
  • Transfer to a registered entity
  • Destroy---Autoclave, incinerate, bleach
  • Documentation
  • CDC Form 4 (www.cdc.gov/od/sap)
  • Maintain a copy of the record for 3 years

69
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