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Tests for equality of scale

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... of data (two groups m n=N), the Van der Waerdan score is defined as V(i) = F-1(i/(N 1) ... hypothesis by doing a permutation test on the sum of the Van der ... – PowerPoint PPT presentation

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Title: Tests for equality of scale


1
  • Computing the ranks of data is only one of
    several possible so-called scoring methods that
    are in use... Section 2.7 reviews three of them
    well look at the Van der Waerden scores For
    X1, ... , XN as our combined set of data (two
    groups mnN), the Van der Waerdan score is
    defined as V(i) F-1(i/(N1))
  • i.e., the standard normal quantile of i/(N1)
  • (in R, this is done with the qnorm function and
    the values for various N are given in Table A.5)
  • Once these scores are computed, we test the
    usual two-sample hypothesis by doing a
    permutation test on the sum of the Van der
    Waerden scores on one of the groups if there
    are ties in the data, we average the V. d. W.
    scores as we did with the ranks...
  • See Table 2.7.1, p. 51 for a comparison. Try
    in R
  • sum(qnorm(rank(c(granite,basalt))/13)16)
  • Try this test on problem 5, page 73... How
    does the p-value relate to the one you computed
    with the Wilcoxon rank-sum statistic?

2
  • FIGURE 2.8.1, page 52 two distributions with
    the same location parameters, but different scale
    parameters.

3
Tests for equality of scale
  • Assume Xi from treatment 1 and Yj from
    treatment 2 as follows Xi ??????x and Yj
    ??????y where the epsilons are iid with median
    0. Both the X's and the Y's have the same
    location m but different scale parameters. The
    null hypothesis is H0 ?????????
  • There are two nonparametric tests we'll
    consider
  • The Siegel-Tukey test
  • The Ansari-Bradley test
  • Both of these tests require a different way of
    ranking the data
  • arrange the data from smallest to largest
  • assign rank 1 to the smallest obs, rank 2 to
    the largest, rank 3 to the next largest, rank 4
    to the next smallest, etc.
  • to get the Siegel-Tukey statistic, apply the
    Wilcoxon rank sum test - the smaller ranks and
    smaller rank sum come from the group with higher
    variability (see Fig. 2.8.1). Use the critical
    values of the Wilcoxon statistic (Table A3 in our
    book) or in R

4
  • to get the Ansari-Bradley statistic rank in the
    following way rank 1 goes to both the smallest
    and largest observations rank 2 to both the
    next smallest and the next largest etc. Then
    compute the sum of the ranks of treatment 1 - the
    problem is that p-values can't be obtained from
    Table 3 anymorebut both SAS and R have exact
    p-values available in their software.
  • Let's look at Example 2.8.1 on page 53
  • in SAS use PROC NPAR1WAY ST AB CLASS TREATMENT
    EXACT ST AB VAR OUNCES
  • here, TREATMENT is the grouping variable and
    OUNCES is the response. ST stands for
    Siegel-Tukey and AB stands for Ansari-Bradley
  • there is a function in R called ansari.test (the
    package is ctest - you might have to load it?).
    Check out the help file on this function I
    haven't found one for doing the Siegel-Tukey
    test can you write one?
  • another possibility is to use a permutation test
    based on the ratio of the sample deviances see
    p. 54 and Figure 2.8.2 for the RMD test. Use R
    do this for HW. That is, replicate the results
    of Example 2.8.2 and show your empirical p-value
    is around .07
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