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HIRU Health Information Research Unit for Wales

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Title: HIRU Health Information Research Unit for Wales


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HIRUHealth Information Research Unit for Wales
  • David Ford

3
  • Centre for Health Information, Research
    Evaluation (CHIRAL)
  • Institute of Life Sciences
  • School of Medicine
  • Swansea University

4
Centre for Health Information Research
Evaluation
  • CHIRALs research areas
  • Health Services Research
  • Clinical Epidemiology Diabetes
  • Social and Epidemiological Psychiatry
  • Primary care
  • Injury and Environment
  • Health Information Management
  • Mathematical Modelling
  • Clinical Research Unit
  • Qualitative Research

5
Cross cutting themes
  • Patient-based trials
  • Trials and evaluations of complex interventions
  • Cohort studies
  • Advanced methodologies (outcomes, qualitative,
    modelling, etc.)
  • Use of routine data for research

6
Development of a health environment
information research platform Health
Information Research Unit
  • Background and Methods

7
Simple questions which cannot be easily answered
in Wales
  • What is the prevalence of any chronic disease in
    any area of Wales?
  • Is disease x increasing or decreasing in Wales?
  • What amount of money/resource is spent on
    different disease groups in Wales?
  • Is the health of a population being adversely
    affected by living closer to
  • If care is redesigned in a particular way what
    will be the likely impact on primary/secondary
    care and different populations?

8
More questions which cannot be easily answered in
Wales
2.
  • What is the impact of poverty/socioeconomic
    status/deprivation on the demand for health
    services?
  • Is this practices higher/lower referral
    rate/prescribing etc due to a different
    disease/illness burden?
  • What additional workload is needed to meet
    national service frameworks (NSFs)/changes in
    contract etc?
  • How many patients in Wales would benefit from a
    new treatment supported by NICE and how much
    would this cost?
  • How does the physical environment influence
    health ?

9
HIRU Background and methods
  • Vast amounts of electronically-stored information
    held in
  • the NHS
  • local government
  • central government
  • other organisations. . . . much of it held at
    an individual level
  • These data, were they all to be available for
    simultaneous analysis, offer enormous potential
    to conduct and support research

10
The challenge
  • Data collected for wide variety of purposes
  • Generally only used for original purpose (if at
    all!)
  • Data held in large number of organisations
  • Held in variety of formats, variation in
    ontologies
  • Known and unknown data quality issues
  • Data extraction and transportation difficult
  • Data volumes enormous
  • Data protection / confidentiality hurdle
  • Intelligent (thoughtful) analysis essential

11
The future looks good . . .
  • National Programmes of NHS IT (Connecting for
    Health and Informing Healthcare in Wales) offer
    potentially excellent datasets for research.
  • Current priority is delivering clinical benefits,
    although secondary uses of data is being
    considered.
  • Still some time until research uses of data will
    be fully realised
  • Full breadth of non-NHS data sources unlikely to
    be in scope in near future

12
Moving forward . . .
  • Health Information Research Unit (HIRU) funded by
    research centre grant by Wales Office of Research
    Development (WORD)
  • Three year grant (in the first instance long
    term research infrastructure development)
  • Staff appointed Sept 06
  • Formally launched by Minister of Health and
    Social Care, Welsh Assembly Government, Nov 06

13
HIRU built on a good pedigree of work in Swansea
  • Clinical systems development and implementation
  • RCP iLab project
  • Public Health analysis
  • Using routine data for primary research
  • Blue C supercomputer at School of Medicine,
    Swansea University

14
Computing infrastructure
  • Blue C supercomputer, one of the fastest
    computers in Europe dedicated to Life Science
    research
  • Strategic partnership with IBM (through School of
    Medicines Institute of Life Sciences initiative)
  • Advanced software toolset (database, data mining,
    GIS)
  • Specialist support through Anix

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Blue C Computer
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HIRU programme aims
  • Develop new methodologies for accessing and
    combining routine data in ways which do not
    breech data confidentiality rules and
    regulations, but which still permit the use of
    data for a wide range of research purposes.
  • Explore how to use routinely collected and other
    data to support large scale multi-site
    intervention and cohort studies and policy
    relevant research.
  • Develop innovative analyses of large and combined
    datasets
  • Develop methods for data capture to common
    standards and definitions in multiple and remote
    locations.

17
Focus on Wales
  • Small country - 3 million population
  • Accessible leadership
  • Desire to be smart
  • 22 Local Health Boards ( PCT) coterminous with
    Local Authorities, 14 NHS Trusts
  • Wide variation in health from near best to worst
  • National Programme for IT (Informing Healthcare)
    working incrementally)

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Progress through partnership
  • Health Solutions Wales (HSW)
  • Welsh Assembly Government Information Services
    Division (CHIP Programme PCIMT)
  • Informing Health Care
  • National Public Health Service Wales
  • CRC Cymru organisations and other research groups
  • And particularly . . .
  • NHS and Local Authority organisations

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Our approach
  • Individual confidentiality is at the core of our
    approach (DAPP)
  • No identifiable confidential information is
    passed to anyone involved
  • The project is about information linkage across
    domains and organisations
  • We act responsibly with the data. HIRU is not a
    data mart. Analysis is strictly protocol-driven.
    Disclosure control rules are applied to ensure
    confidentiality.
  • We use data for health-related research and to
    provide useful information back to partner
    organisations that provide data
  • Information used for knowledge not for
    performance management!

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HIRU methodology (example)
Construct ALF
Validate
HIRU (Blue C)
Health Solutions Wales
Data Provider
Anonymisation process
Recombine
Encrypt and load
Operational system
HIRU (Blue C)
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Matching Anonymisation Process
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Matching
  • Each record matched to a definitive population
    register for Wales - the NHS Administrative
    Register carefully maintained by the BSCs and
    HSW
  • Exact match against date of birth, forename and
    surname
  • Lexicon techniques common variations of
    forename, such as "Liz" and "Beth" for
    "Elizabeth"
  • Then, if no match, use
  • Soundex alternate phonetic spellings of the
    forename or surname, using Soundex functions.
  • Fuzzy Matching Are there possible matches of
    either date of birth, address or name?
    Allowances for possible data entry errors.
    Possible matches are scored and weighted against
    frequencies of occurrence within the Welsh
    population. Matches are currently accepted if
    the probability is above 90.

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Anonymisation
  • NHS number encrypted using highly secure 256 bit
    encryption algorithm
  • Unique surrogate value assigned against the
    encrypted value to become the Anonymous Linking
    Field (ALF)
  • Encryption key held within HSW and only known by
    them
  • Personal details deleted away before the file is
    returned to HIRU as File 3
  • Second encryption of ALF occurs while data is
    flowed to HIRU (key known only to HIRU DBA) to
    create the ALF-E
  • Under development R-ALFs (Anonymised
    households)

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Geocoding
  • Each address / postcode replaced by a geocode
  • Lower Super Output Area standard small area
    geography of c. 1,500 people
  • 1896 LSOAs in Wales

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Data warehouse design
  • Built in DB2 Data Warehouse Edition
  • On IBM P Series supercomputer running AIX
  • Supports the entire lifecycle of the data HIRU
    receives from
  • loading of external data
  • encryption and second level anonymisation
  • base storage
  • historisation of facts and dimensions
  • data cleansing and
  • presentation of the data to users

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SAIL Pilot Project
  • SAIL Secure Anonymous Information Linkage
  • LHB/LA (PCT) area as early adopter pilot (pop.
    227k)
  • Developing and refining the methods
  • Testing quality
  • Research question generation
  • Sharing the benefits
  • Reporting the learning
  • Planning for scaling-up

28
SAIL Data Bank Pilot (Swansea)
  • Access and load a range of datasets
  • Inpatient day case admissions
  • Outpatient appointments
  • AE data
  • Social Services data (older people, mental
    health, learning disability, children)
  • Births and deaths
  • GP morbidity prescriptions (35 of 36
    practices)
  • Child health database
  • Pathology results from NHS Trust
  • NHS Direct Wales 0845 call centre contacts
  • Many more in the pipeline . . . . .

29
Volumetrics (Swansea pilot)
  • With national data for inpatients and outpatients
    and local (Swansea) data for primary care and
    social services, data volumes are large
  • Information on 2.42 million people
  • Detailed SAIL information on 227k people
  • Success rate for ALFing NHS data c 99
  • Success rate for social services data currently
    85 (using tight matching criteria)
  • Number of health events recorded 34,700,000
  • Number of records in the databank 105,million
    and rising!

30
Patient Journey Analysis- Health and Social Care
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Post-pilot developments (in progress)
  • Data extraction utility for all 497 GP practices
    (weekly extracts)
  • Automated incremental feeds from national
    datasets (monthly)
  • National data transportation fabric (for NHS and
    non-NHS) with full file handling, checking,
    receipting etc)
  • Fully automate processes for matching,
    anonymisation and database loading
  • Support national clinical data collections for
    research
  • Extend depth and breadth of health data suppliers
    to cover all Wales
  • Focus on non-health suppliers (social care,
    education and housing)
  • Building on pathology data to integrate imaging
    and biomedical testing data
  • Part of Phase 1 of ONIX with NCRI Informatics
    Initiative (live meta-data index)

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Data transportation fabric
33
Building clinical (2 care) datasets
  • Working with Wales-wide groupings of clinical
    specialities
  • Agree a basic national research dataset
  • Developed a generic data architecture to support
    data collection, for all conditions
  • Make available web tool for data capture and
    local analysis
  • Anonymised version fed into SAIL Data Bank
  • Starting with stroke, ankylosing spondylitis, and
    soon cancer

34
Individual-level data acquisition strategy
AE Attendances
Social Services
Other national datasets
Clinical data collections
Child Health
GP Out of Ours
Education attainment
Pathology
Radiology
NHS Direct
Housing
Cancer
Screening
Anomalies
Out patients
Inpatients
GP Data
Geographical coverage
Ecological / environmental data
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Some datasets individual and ecological
  • Clinical databases
  • Cancer
  • Screening (multiple conditions)
  • Congenital Anomalies
  • Myocardial Infarction
  • Diabetes
  • Stroke
  • Arthropathies
  • Etc.
  • Ecological datasets (many are GIS)
  • Census
  • Ordnance Survey - Mastermap
  • Social Housing
  • Transport
  • Environmental Health
  • Planning
  • Leisure
  • Government departments and agencies
  • Individual level - health
  • Population (NHSAR)
  • Inpatients -PEDW (HES)
  • Births
  • Deaths
  • Outpatients
  • AE
  • GP Data
  • Laboratory systems
  • Child Health Database Wales
  • NHS Direct Wales
  • Radiology- Reporting and Imaging
  • Individual level non health
  • Social Services
  • Educational Attainment
  • Housing

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Assuring confidentiality
  • Data Anonymisation Process approved by wide range
    of Information Governance officials and bodies
    (Caldicott etc)
  • Large scale and very rich data (all anonymised)
  • Subsets of data not sent externally
  • Access controls necessary
  • Research protocol driven access
  • Analysis plans crafted to ensure no disclosure
    (avoiding low cell counts)
  • Secure analysis laboratory with secure
    workstations
  • Portals in development with no data transfer

37
Types of research supported by data linkage
  • Demonstrating and explaining variation in health
    service utilisation with a view to developing
    testable hypotheses
  • Improving capacity for (and efficiency of)
    clinical trials
  • Improving drug and device safety (long term
    follow-up)
  • Population health studies and evaluation of
    policy initiatives
  • Hybrid cohort studies using traditional
    recruitment and e-approaches
  • Health system and biomedical Modelling

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Thank you
39
HIRU programme aims
  • Develop new methodologies for accessing and
    combining routine data in ways which do not
    breech data confidentiality rules and
    regulations, but which still permit the use of
    data for a wide range of research purposes.
  • Explore how to use routinely collected and other
    data to support large scale multi-site
    intervention and cohort studies and policy
    relevant research.
  • Develop innovative analyses of large and combined
    datasets
  • Develop methods for data capture to common
    standards and definitions in multiple and remote
    locations.

40
Clinical trials linked data
  • Quicker and more accurate feasibility studies,
    searching multiple databases for
    inclusion/exclusion criteria
  • Development of methods for electronic enhanced
    recruitment (EER) of participants
  • Testing efficacy of EER an RCT within an RCT
  • Provision of long term outcomes

41
Identifying suitable trial participants Site
screening
Sample population (n6474)
  • Excluded (n 6409)
  • Does not have type 2 diabetes (n 6222)
  • Is lt18 years (n 0)
  • Not receiving 1 or 2 OADs for 2 months (n
    171)
  • The subjects most recent HbA1c is not 7.5 and
    lt 11 (if on mono therapy) or 7 and lt 10
    (if on combo therapy) and do they have a BMI lt 40
    kg/m2 (n 6)
  • Smoked within the last 6 months (n 3)
  • The subject has clinically significant active
    pulmonary disease (excluding asthma) or
    cardiovascular disease (unstable angina within
    the last 6 months or MI within the last 12 months
    and/or heart failure NYHA class I to IV) (n 6)
  • The subject has proliferative retinopathy or
    maculopathy requiring acute treatment (n 0)
  • The subject has uncontrolled / untreated
    hypertension ( 180/100 mmHg) (n 1)
  • The subject has had treatment with systemic
    steroids within the past 2 months prior to
    screening (n 0)

Potential participants identified (n65)
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An RCT within an RCT
  • Test the hypothesis that electronic enhanced
    recruitment (EER) works
  • More patients entered
  • Patients recruited more quickly
  • Cost effective
  • Cluster RCT design
  • Research practices randomised into I and C
  • EER instituted in I Group

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Example of HSR using linked HIRU data (with
Cannings, Butler, Dunstan Cardiff)
  • Are patients who are not prescribed an antibiotic
    for an acute Respiratory Tract Infection (RTI) at
    a higher risk of developing a complication than
    those who are prescribed an antibiotic?
  • Cohort Patients diagnosed with a first
    episode of an acute RTI in 24 general
    practices
  • Exposure Antibiotics prescribed at first
    presentation of RTI
  • Outcome Complications diagnosed in Primary and
    Secondary Care

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Can routinely collected, electronically stored
data be used for health technology assessment by
randomised controlled trial?
  • We repeated the analysis of four exemplar RCTs
    using data extracted from local electronic data
    systems
  • Studies were small, multicentre HTAs in South
    Wales addressing four different technologies
    (open access to outpatients investigation of
    sleep apnoea autologous blood transfusion
    surgery for incontinence)
  • Funded by the HTA Programme

47
Summary of exemplar studies
48
Data sources
  • Central returns PEDW
  • Hospital information systems PAS Pathology
    Radiology
  • Clinical system GeneCIS (symptoms, signs,
    diagnoses, interventions)

49
Conclusions
  • Routinely collected data can support RCTs if
    clinically rich, and held in electronic form
  • Patient and professional preference would still
    need to be collected
  • Data availability, validity and standardisation
    must be improved
  • Costs would be less, and larger trials could be
    run
  • Williams JG et al The value of routine data in
    health technology assessment can randomised
    trials rely on existing electronic data? Health
    Technology Assessment 2003vol 7no 6
  • Cohen et al Estimating the marginal value of
    better research output Designed vs routine
    data in randomised controlled trials. Health
    Economics 200312959-74

50
Can outcomes be monitored using clinical data as
a proxy?
  • Yes - if clinical data is captured in structured
    form in sufficient detail
  • Symptoms and signs can be used as proxy measures
    for generic and disease specific HRQL measures
  • Assessment of the usefulness and cost in routine
    practice needed
  • Hutchings H, Cheung WY, Williams JG et al
    International Journal of Health Technology
    Assessment 2005

51
Longitudinal Tracking Patient Journey Analysis
  • Being able to track anonymised individuals across
    multiple datasets longitudinally has huge
    potential benefits
  • Understanding complex NHS and SS care packages
  • Economic modelling
  • Effects of interventions in one sector on others
  • More comprehensive and long term follow up

52
Population health studies
  • Electronic cohort studies eCohort
  • Suitable when exposures and outcomes are
    routinely collected
  • Electronically enhanced cohorts a hybrid
    between a traditional and eCohort with reduced
    costs
  • Case series, case control studies, etc
  • Evaluation of policy initiatives interrupted
    time series

53
Future Research plans
  • Work collaboratively with thematic research
    networks in Wales
  • Develop/support major research platforms
  • Public Health Centre of Excellence
  • MRC Centre for Ageing Research
  • NIHR Injury Prevention
  • Wellcome Trust LADA Cohort
  • WORD/RCs - Environments for Healthy Living a
    Family Cohort Study on the impact of the changing
    social, physical and technological environment on
    health
  • Cost effectiveness of conducting national
    clinical audits using routine data (Health
    Fundation)

54
I could go on and on . . .But I wont!Thank
you!
55
Demonstrating and explaining variation in health
service utilisation examples using record
linkage
  • Radiology rates in AE
  • Hospital admissions from ankle fractures
  • Co-morbidity adjustment for outcomes
  • MI admissions
  • Length of stay Stroke admissions

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2 way linked data admission rates for ankle
fractures by hospital
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Helping to understand trends in emergency
attendances and admissions
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Emergency Hospital Admission rates for Swansea
(LSOA)
Demand on NHS for Emergency Admissions for
2004-2005
63
Wider area comparisons LOS variability
64
Outcome Measurement
  • WAG is moving to measuring/commissioning on
    outcomes
  • Important that measures used are robust and fair
  • HIRU is assisting with methodological
    developments in outcome measurement (SLIM)
    project
  • Reconstructing QoL measures from Routine Data

65
Co-morbidity adjustment for outcomes
  • Co-morbidity affects outcomes
  • Are co-morbidities reliably recorded on hospital
    discharge data ?
  • What is the variation in frequency of
    co-morbidity recording by hospitals?
  • What is the frequency of COPD in subsequent
    admissions where listed as co-morbid factor in
    primary admission with an MI?

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Frequency of co-morbidity recording in hospital
discharges
  • Variation in recording between trusts no
    logical reasons for this data quality issue
  • 80 likelihood of subsequent mention of COPD
  • Could be improved by primary/secondary care data
    linkage
  • import co-morbidities from primary care
  • severity and diagnostic validation from pathology

68
Majority Use NHS Trustsin Wales Admissions
Outpatients
69
An example of collaborative operational research
  • Clinicians/NHS would like to know the likely
    impact of bowel screening on workload
  • Collaboration between Screening Services/ WCISU /
    HIRU
  • Plan to link anonymised cancer registry data with
    utilisation datasets in primary and secondary
    care
  • Determine service utilisation by stage of cancer
  • Model likely impact on service workload
  • Plan services to anticipate needs

70
3 way linkage Stroke Survival Rates
71
Mapping and GIS applications
  • The physical and built environment influences
    health
  • An area where local government can strongly
    influence health
  • An area where there is tremendous opportunity for
    collaborative work and research between health
    and local government
  • Development of mapping, GIS and increasing
    numbers of ecological datasets offers huge
    potential

72
The Built Environment and Health
  • How does the design of the built environment,
    planning and land use policies influence health
    through?
  • Providing equitable access to services
  • Supporting physical activity through walking and
    cycling
  • Providing safe environments for pedestrians
  • Providing safe and exciting play areas for
    children
  • And many more.

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Mastermap topographic layer
74
Mastermap premise types from address layer
75
Example of traffic calming distribution
76
Social equity in the provision of traffic calming
77
Primary School Entry Children Posterior mean
relative risks for overweight children
Non-Spatial Model
78
Percentage of overweight children by 5th of
Deprivation, LSOA, WIMD 2005, n13,416
79
Collaborative research with City and County of
Swansea
  • Development and testing of automatic pedestrian
    activity devices
  • Studies in pedestrian safety
  • Evaluating interventions aimed at increasing
    physical activity
  • Use of GIS datasets to support research into
    environmental influences on health
  • Playground distribution
  • Others.

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Distance to Play Areas in Swansea
(m)
2.3km
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Example of research question using linked data
  • Are patients who are not prescribed an antibiotic
    for an acute Respiratory Tract Infection (RTI) at
    a higher risk of developing a complication than
    those who are prescribed an antibiotic?
  • Cohort Patients diagnosed with a first
    episode of an acute RTI in 24 general
    practices within Swansea LHB, in 2005.
  • Exposure Antibiotics prescribed at first
    presentation of RTI
  • Outcome Complications (quinsy, pneumonia etc)
    diagnosed in Primary and Secondary Care

84
Linkage
Hospital data
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