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Numerical Model Development Part I

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2006 SCIENTIFIC SYMPOSIUM OF THE SCIB The Digital Child Project Numerical Model Development Part I Pediatric Anatomy Albert I. King Bioengineering Center – PowerPoint PPT presentation

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Title: Numerical Model Development Part I


1
2006 SCIENTIFIC SYMPOSIUM OF THE SCIB
The Digital Child Project
  • Numerical Model Development Part I Pediatric
    Anatomy
  • Albert I. King
  • Bioengineering Center
  • Wayne State University
  • Birmingham, Alabama
  • December 13, 2006

2
Objectives
  • Identify level of detail needed for pediatric FE
    models, focusing on anatomical differences
    between adults and children
  • Create appropriate whole body anthropometry for
    3, 6, and 10 year olds using clinical CT and MRI
    data

3
Pediatric Anatomy
  • Child ? Small Adult
  • Anatomical and morphological changes throughout
    maturation
  • Example
  • Ossification of skeletal structures
  • Skull
  • Spine

4
Pediatric Anatomy
NOT TO SCALE
2 YO 5 YO ADULT
Images from http//www.boneclones.com
5
Pediatric Anatomy
Image from http//faculty.washington.edu/chudler/d
ev.html
6
Pediatric Anatomy
NOT TO SCALE
Images from http//www.yoursurgery.com/ProcedureDe
tails.cfm?BR4Proc19
7
Pediatric Anatomy
NOT TO SCALE
Images from http//faculty.clintoncc.suny.edu/facu
lty/Michael.Gregory/files/ Bio20102/Bio2010220l
ectures/Motor20Systems/infant_skull.jpg and
http//www.uoftbookstore.com/online/prodimg/49090.
jpg
8
Pediatric Anatomy
ADULT
3 YO
6 YO
INFANT
NOT TO SCALE
Image altered from Kumaresan, et al. (2000)
9
Flowchart
10
Timeline
MONTH 2 4 6 8 10 12 14
HIC APPROVAL (MED REC DONE)
OBTAIN DATA (20 COMPLETE)
IDENTIFY LEVEL OF DETAIL
CREATE SURFACE CONTOURS
11
HIC Approval
  • Institutional Review Board
  • Human Investigation Committee of
  • Wayne State University
  • Approved collection of pediatric image data from
    medical records on September 1, 2006
  • Application in process to obtain whole body
    images from pediatric cadavers (nondestructive)

12
Data Collection
  • MRI data collected from 11 subjects, further MRI
    and CT data in progress in collaboration with the
    Chair of the Radiology Dept.
  • Target ages (either gender)
  • 2.5-3.5 years
  • 5.5-6.5 years
  • 9.5-10.5 years

13
Data Collection
  • MRI data for each subject includes
  • Several orientations
  • Axial, coronal, sagittal
  • Several types
  • T1, T2, etc.
  • May include contrast
  • Some MRAs (blood vessels)

14
Segmentation
  • Challenges in image processing
  • Abnormal anatomy
  • Slice orientation
  • Image quality
  • Slice thickness and resolution
  • Noise
  • Incomplete structures of interest

15
Abnormal anatomy present- reason for scans
16
Segmentation
  • Solutions - Abnormal anatomy
  • Bilateral structures can be reflected
  • Removal of pathological tissue formations and
    manual interpolation
  • If too abnormal, collect new data from medical
    record
  • Pediatric cadavers chosen may have limited
    abnormalities if death due to trauma

17
Slice orientation- non-orthogonal
18
Segmentation
  • Solutions Slice orientation
  • Can make structure identification difficult for
    the engineer, consult radiologist
  • Translation and/or rotation of structures may be
    necessary for integration into whole body model
    (addressed later)

19
Image Quality
3D Doctor
E-Film Lite
3D Slicer
Mimics
20
Slice thickness- ranges from 1.8-5.0 mm, usually
4-5 mm
21
Segmentation
  • Solutions Slice thickness and resolution
  • Each subject has numerous image series, choose
    the highest resolution
  • Smoothing after surface generated
  • If pediatric cadavers become available, we can
    choose finer cuts and higher resolutions with no
    radiation exposure hazard

22
Noise
23
Segmentation using Mimics without noise removal
Segmentation with noise removed
24
Segmentation
  • Solutions Noise
  • Manual removal with image processing and medical
    image segmentation software packages
  • May not affect structure of interest
  • Collect new data from the medical record

25
Some structures are incomplete due to Field of
View In this case, the brain Often a problem in
junction between thorax and abdomen (liver often
incomplete in both)
26
Segmentation
  • Solutions- Incomplete structures
  • Manual interpolation
  • Collect new data for that body part from medical
    record
  • Could be solved if pediatric cadavers become
    available

27
Scaling
  • Combine body parts from different subjects to
    create a whole body model which is average
    sized
  • Preserve developmental anatomy
  • Scaling child to child of similar maturation
    level (NOT adult to child)
  • Geometric scaling only (based on Irwin, et al.
    1997)

28
Scaling
  • Average child anthropometry by age determined
    from Snyder, et al. (1977)
  • External measurements only, no data available on
    relationship between external landmarks and
    internal landmarks (noted by Reed, et al. at
    UMTRI, 2005, 2006)

29
Scaling
  • Snyder data provided
  • Heights
  • Breadths
  • Circumferences
  • of external landmarks
  • Age ranges of interest
  • 2.0-3.5, 5.5-6.5, and 9.5-10.5 years

30
Head Dimensions
in the sagittal and coronal planes
Image altered from http//ovrt.nist.gov/projects/a
nthrokids/
31
Thorax Dimensions in the coronal plane
Sagittal plane data also available
Image altered from http//ovrt.nist.gov/projects/a
nthrokids/
32
Scaling
  • Challenges
  • All anthropometric data cannot be applied to each
    subjects scans
  • For example, this abdomen MRI precludes measuring
    chest breadth at axilla

Breadth at Axilla
Natural Waist Breadth
Waist Breadth
33
Scaling
  • Solutions- Scaling
  • Scale using all available external measurements
  • When finished, check realism of complete body in
    terms of proportion
  • Use whole body images from pediatric cadavers to
    determine relationships between internal and
    external geometries

34
Positioning
  • Complete 3D solid model must be properly
    positioned for use in analysis
  • Translation of entire model
  • Rotation of joints
  • Automotive seating postures to be based on Reed,
    et al. (2005, 2006)
  • Data not available for three year olds

35
Positioning
  • Challenge
  • Snyders seated anthropometries not
    representative of automotive seating postures
  • Sources of such seating postures for children
    incomplete

Image altered from http//ovrt.nist.gov/projects/a
nthrokids/
36
Positioning
Positions of the extremities not reported
Data available for 6 YO and 10 YO, including head
angle and positions relative to H-point
Image altered from Reed, et al. (2005)
37
Positioning
  • Solutions- Positioning
  • Extrapolation
  • From Reed, et al. data
  • May perform small study at WSU
  • Will not be representative of the population

38
Proposed Positioning Study
39
Discussion and Conclusions
  • In creating accurate pediatric 3D model surfaces
  • Pediatric medical images of a lower quality than
    adult due to standard procedures
  • Issues can be overcome will the use of a
    combination of software and manual editing

40
Discussion and Conclusions
  • In the absence of an average sized pediatric
    cadaver, geometric scaling between subjects of
    similar maturation levels will be necessary
  • Positioning of the 3D model involves sparse data
    sets, but reasonable postures can be achieved
    with additional experimental information

41
Future Work
  • Collect more MRI and CT data, especially CT in
    regions of partial ossification
  • Continue work to procure whole body images of
    pediatric cadavers
  • Determine appropriate scaling method and
    calculate component locations (joint centers)

42
Future Work
  • Evaluate open source and commercial image
    processing/segmentation software
  • Evaluate different segmentation methods using
    known partially ossified structures
  • Create segmentation protocol appropriate for
    pediatric anatomy

43
Thank You
44
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45
INFANT 1-3 YO 3-6 YO 11-14 YO ADULT
Image altered from Yoganandan, et al. (1999)
46
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47
Pelvic Dimensions in the coronal plane
Image altered from http//ovrt.nist.gov/projects/a
nthrokids/
48
Positioning
  • Automotive seating postures to be based on Reed,
    et al. (2005, 2006)
  • Data not available for three year old

Posture Variable Sitter-Selected (Degrees) ATD Standard (Degrees)
Neck Angle 3.5 3.3
Thorax Angle 10.0 9.8
Abdomen Angle 45 34.7
Pelvis Angle 47.6 43.5
Average age 8.4 years
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