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Chemotaxis and Cellular Slime Molds

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Chemotaxis and Cellular Slime Molds Junping Shi Basic diffusion mechanism You may have noticed these without realizing what are: if you see a slimy surface on your ... – PowerPoint PPT presentation

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Title: Chemotaxis and Cellular Slime Molds


1
Chemotaxis and Cellular Slime Molds
Junping Shi
2
Basic diffusion mechanism
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You may have noticed these without realizing what
are if you see a slimy surface on your shower
curtains or walls or a dewy layer on your
lawn.... More photos http//waynesword.palomar.e
du/slime1.htm Video http//dictybase.org/Multimed
ia/development/development.html
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Growth of slime mold
  • In its native state a slime mold population
    consists of
  • hundreds or thousands of unicellular amoeboid
    cells, and each one moves independently and feeds
    on bacteria.
  • When food becomes scarce, the amoebae enter a
    phase of starvation. An initially uniform cell
    distribution develops a multicellular mass. Cells
    are attracted to these loci called aggregate and
    move towards them. Eventually they become a
    sluglike multicellular mass.
  • The sluglike collection of cells undertakes a
    sequence of shapes including that of a dome. And
    at the end, the result is a slender, beautifully
    sculptured stalk bearing acapsule at its top.
    (It is called a sporangiophore.)

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Life cycle of slime molds
http//www.sfu.ca/epalsson/research.html
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  • Question What cause cells to aggregate, and how
    do
  • cells know where an aggregation center should
    form?
  • The starved slime mold amoebae secrete a chemical
    that attracts other cells. It is called cyclic
    AMP (cAMP), whose
  • role is that of an intracellular messenger. To
    model the
  • aggregation of slime mold, the following
    assumptions are made (Keller-Segel, 1970)
  • Individual cells undergo a combination of random
    and
  • chemotactic motions towards cAMP.
  • Cells neither die nor divide during aggregation.
  • cAMP is produced in a constant rate by each cell.
  • The rate of degradation of cAMP depends linearly
    on
  • its concentration.
  • cAMP diffuses passively over the aggregation
    field.

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Initially, a and c are both in a uniform state,
which is presumably the equilibrium state. IF the
constant equilibrium is not stable, then under a
small perturbation, the solution may go towards a
spatially non-constant equilibrium solution. That
implies an aggregation may occur, and u will
become a function which concentrates at one point
or several points. Mathematical question for
which parameter values, the equilibrium solution
is unstable, and what is the unstable mode?
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