tumour rd pattern formation - PowerPoint PPT Presentation

1 / 51
About This Presentation
Title:

tumour rd pattern formation

Description:

Mathematical modelling of solid tumour growth: Applications of Turing pre-pattern theory Mark Chaplain, The SIMBIOS Centre, Department of Mathematics, – PowerPoint PPT presentation

Number of Views:75
Avg rating:3.0/5.0
Slides: 52
Provided by: chap190
Category:

less

Transcript and Presenter's Notes

Title: tumour rd pattern formation


1
Mathematical modelling of solid tumour
growth Applications of Turing pre-pattern theory

Mark Chaplain, The SIMBIOS Centre, Department of
Mathematics, University of Dundee, Dundee, DD1
4HN.
chaplain_at_maths.dundee.ac.uk http//www.maths.dund
ee.ac.uk/chaplain http//www.simbios.ac.uk
2
Talk Overview
  • Biological (pathological) background
  • Avascular tumour growth
  • Invasive tumour growth
  • Reaction-diffusion pre-pattern models
  • Growing domains
  • Conclusions


3
The Individual Cancer Cell A Nonlinear Dynamical
System

4
The Multicellular Spheroid Avascular Growth
  • 10 6 cells
  • maximum diameter 2mm
  • Necrotic core
  • Quiescent region
  • Thin proliferating rim

5
Malignant tumours CANCER
Generic name for a malignant epithelial (solid)
tumour is a CARCINOMA (Greek Karkinos, a crab).
Irregular, jagged shape often assumed due to
local spread of carcinoma.
Basement membrane
Cancer cells break through basement membrane
6
Turing pre-pattern theory Reaction-diffusion
models
7
Turing pre-pattern theory Reaction-diffusion
models
Two morphogens u,v Growth promoting factor
(activator) Growth inhibiting factor (inhibitor)
Consider the spatially homogeneous steady state
(u0 , v0 ) i.e.
We require this steady state to be (linearly)
stable (certain conditions on the Jacobian matrix)
8
Turing pre-pattern theory Reaction-diffusion
models
We consider small perturbations about this steady
state

it can be shown that.
9
Turing pre-pattern theory Reaction-diffusion
models
...we can destabilise the system and evolve to a
new spatially heterogeneous stable steady state
(diffusion-driven instability) provided that

where
DISPERSION RELATION
10
Dispersion curve
Re ?
k2
11
Mode selection dispersion curve
Re ?
k2
12
Turing pre-pattern theory.
  • robustness of patterns a potential problem
    (e.g. animal coat marking)
  • (lack of) identification of morphogens

???
1) Crampin, Maini et al. - growing domains
Madzvamuse, Sekimura, Maini - butterfly wing
patterns
2) limited number of morphogens found de
Kepper et al
13
Turing pre-pattern theory RD equations on the
surface of a sphere
Growth promoting factor (activator) u Growth
inhibiting factor (inhibitor) v Produced, react,
diffuse on surface of a tumour spheroid
14
Numerical analysis technique
Spectral method of lines
Apply Galerkin method to system of
reaction-diffusion equations (PDEs) and then end
up with a system of ODEs to solve for (unknown)
coefficients
15
Galerkin Method
16
Numerical Quadrature
17
Collaborators
  • M.A.J. Chaplain, M. Ganesh, I.G. Graham
  • Spatio-temporal pattern formation on spherical
    surfaces numerical
  • simulation and application to solid tumour
    growth.
  • J. Math. Biol. (2001) 42, 387- 423.
  • Spectral method of lines, numerical quadrature,
    FFT
  • reduction from O(N 4) to O(N 3 logN) operations

18
Numerical experiments on Schnackenberg system
19
Mode selection n2
20
Chemical pre-patterns on the sphere
mode n2
21
Mode selection n4
22
Chemical pre-patterns on the sphere
mode n4
23
Mode selection n6
24
Chemical pre-patterns on the sphere
mode n6
25
Solid Tumours
  • Avascular solid tumours are small spherical
    masses of cancer cells
  • Observed cellular heterogeneity (mitotic
    activity) on the surface and in
  • interior (multiple necrotic cores)
  • Cancer cells secrete both growth inhibitory
    chemicals and growth
  • activating chemicals in an autocrine manner-
  • TGF-ß (-ve)
  • EGF, TGF-a, bFGF, PDGF, IGF, IL-1a, G-CSF
    (ve)
  • TNF-a (/-)
  • Experimentally observed interaction (ve, -ve
    feedback) between
  • several of the growth factors in many different
    types of cancer

26
Biological model hypotheses
  • radially symmetric solid tumour, radius r R
  • thin layer of live, proliferating cells
    surrounding a necrotic core
  • live cells produce and secrete growth factors
    (inhibitory/activating)
  • which react and diffuse on surface of solid
    spherical tumour
  • growth factors set up a spatially heterogeneous
    pre-pattern
  • (chemical diffusion time-scale much faster than
    tumour growth time scale)
  • local hot spots of growth activating and
    growth inhibiting chemicals
  • live cells on tumour surface respond
    proliferatively (/) to distribution of
  • growth factors

27
The Individual Cancer Cell

28

29
Multiple mode selection No isolated mode
30
Chemical pre-pattern on sphere no specific
selected mode
31
Invasion patterns arising from chemical
pre-pattern
32
Growing domain Moving boundary formulation
R(t) 1 at
33
Mode selection in a growing domain
t 15
t 9
t 21
34
Chemical pre-pattern on a growing sphere
35
1D growing domain Boundary growth
Growth occurs at the end or edge or boundary of
domain only
Growth occurs at all points in domain
uniform domain growth
36
G. Lolas Spatio-temporal pattern formation and
reaction-diffusion equations. (1999) MSc Thesis,
Department of Mathematics, University of Dundee.
37
1D growing domain Boundary growth
38
1D growing domain Boundary growth
39
Dispersion curve
Re ?
k2
20
90
40
Spatial wavenumber spacing
n k2 n(n1) k2 n2 p2 (sphere) (1D) 2
6 40 3 12
90 4 20
160 5 30
250 6 42
360 7 56
490 8 72
640 9 90
810 10 110
1000
41
2D growing domain Boundary growth
42
2D growing domain Boundary growth
43
2D growing domain Boundary growth
44
2D growing domain Boundary growth
45

46
Cell migratory response to soluble molecules
CHEMOTAXIS
47


Cell migratory response to local tissue
environment cues HAPTOTAXIS
48
The Individual Cancer Cell A Nonlinear Dynamical
System

49
Tumour Cell Invasion of Tissue
  • Tumour cells produce and secrete
    Matrix-Degrading-Enzymes
  • MDEs degrade the ECM creating gradients in the
    matrix
  • Tumour cells migrate via haptotaxis (migration
    up gradients
  • of bound - i.e. insoluble - molecules)
  • Tissue responds by secreting MDE-inhibitors

50
Conclusions
  • Identification of a number of genuine autocrine
    growth factors
  • practical application of Turing pre-pattern
    theory (50 years on.!)
  • heterogeneous cell proliferation pattern linked
    to underlying
  • growth-factor pre-pattern irregular
    invasion of tissue
  • robustness is not a problem each patient has
    a different cancer
  • growing domain formulation
  • clinical implication for regulation of local
    tissue invasion via
  • growth-factor concentration level manipulation


51
Summary
Write a Comment
User Comments (0)
About PowerShow.com