Integrated%20Compound%20Management%20using%20DaylightTM,%20JavaTM%20and%20Oracle - PowerPoint PPT Presentation

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Integrated%20Compound%20Management%20using%20DaylightTM,%20JavaTM%20and%20Oracle

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Integrated Compound Management using DaylightTM, JavaTM and Oracle ... Robert Bamford. Chris Novak. Brad Ziola. Kim Collins. Ben Chang. Special thanks to: ... – PowerPoint PPT presentation

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Title: Integrated%20Compound%20Management%20using%20DaylightTM,%20JavaTM%20and%20Oracle


1
Integrated Compound Management using DaylightTM,
JavaTM and OracleThe GNF Compound Management
System Project
  • Elena Rodriguez, GNF
  • Steven Wilkens, GNF
  • Chris Palmer, MVLLC
  • Jack Crawford, MVLLC

2
Initial GNF Compound Management Challenges
  • No compound registry
  • File-based
  • No searching capability
  • No automated plate tracking
  • Error prone
  • Manual entry
  • No project management
  • Lack of tracking and scheduling
  • Problems with scalability
  • Reliability of underlying systems
  • Manual process bottlenecks

3
Imminent Challenges
  • Growth of compound collection
  • Increased screening throughput
  • Migration from 384 to 1536 storage format
  • Establishment of GNF Lead Discovery effort
  • Spin-off company support

4
Desired Objectives
  • Capture and maintain compound collection in
    secure, scalable, electronic format
  • Design and implement web-based information
    management tools in order to
  • Make intelligent business decisions based on
    current collection status
  • Make intelligent scientific decisions based on
    cheminformatics data

5
Goal The GNF Information Management Center
  • GRS GNF Registration System
  • Secure, scalable, searchable corporate registry
  • PRS Plate Reformatting System
  • Transactional data capture for core facility
    process
  • CLS Container Locator System
  • Enterprise-wide container management
  • CRS Compound Request System
  • Operational component of lead follow-up process

6
GNF Compound Flow
7
GNF Registration System
  • Built on DayCart!
  • Batch load of SD files, library based
  • One-off registration
  • Structure searching
  • Compound library comparison
  • Foundation for compound follow-up

8
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15
GNF Plating Operation
16
Plate Reformatting System
17
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19
Container Locator System
20
Compound Request System
  • On-line ordering of follow-up material
  • Linked to GRS and PRS data

21
Development Team
  • Managed Ventures LLC
  • Jack Crawford
  • Chris Palmer
  • Robert Bamford
  • Chris Novak
  • Brad Ziola
  • Kim Collins
  • Ben Chang
  • Special thanks to
  • Jack Delany, Daylight
  • Michael Tennant, Syrrx
  • Alberto Gobbi, Anadys
  • Bernd Rhode, Novartis
  • Genomics Institute of the Novartis Research
    Foundation (GNF)
  • Steven Wilkens
  • Elena Rodriguez
  • Kristina Burow
  • Jeff Janes
  • Kaisheng Chen
  • Jared Ek
  • Paul Calvin
  • Christina Guintu
  • Dennis Theodoropoulos

22
Technology Stack
23
Demonstration
  • Chris Palmer
  • Managed Ventures LLC
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