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Collaborative Ontology Building with Wikint Preliminary Report

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Title: Collaborative Ontology Building with Wikint Preliminary Report


1
Collaborative Ontology Building with
Wiki_at_ntPreliminary Report
  • Jie Bao and Vasant Honavar
  • Artificial Intelligence Research Laboratory
  • Computer Science Department
  • Iowa State University
  • Ames IA USA 50010
  • baojie,honavar_at_cs.iastate.edu

2
Outline
  • Overview

3
Motivation
  • Ontology construction is a collaborative process
  • direct cooperation among domain experts, and
    software agents
  • indirect cooperation through reuse of published
    ontologies.
  • Integration different participants have only
    partial knowledge of the domain, and hence can
    contribute part of the ontology.
  • Modularity helps!
  • Reconciliation Semantic mismatches and logical
    inconsistencies between independently developed
    ontologies are unavoidable.
  • Existing ontology editors (Protégé, OilEd) are
    mostly focused on stand-alone ontology
    development rather than collaborative
    construction of ontologies.
  • How about KAON, OntoEdit, WebODE, CODE ? Lack of
    modularity

4
Wiki_at_nt
  • Wiki a kind of collaborative documentation
    writing/website building tool
  • _at_nt Ont Ant
  • Ont for ontology
  • Ant to denote a type of collaborative agent
  • Wiki_at_nt a collaborative ontology editor with wiki

5
Ants for ontology
  • Without SHOE how can you be a RACER?
  • Without Sesame how can you make OIL?
  • Semantic Web is a plan of good
  • But without ontology its only a nil.
  • Everyone adds a small piece of brick
  • It takes the labor of many to make the Rome real.
  • Lets create ontology hand in hand
  • Just like ants build their hill.

6
Proposed Approach
Wiki Engine for Collaborative Editing
Underlying Language to supportmodularity and
reconciliation
Browser-based Editor
Dynamic loading of Partial Model
Agent Community
Serialization
7
Outline
  • Overview
  • Ontology Language Extension

8
Ontology Language Extension - to support
modularity
  • POWL package-based ontology language
  • Package is an ontology module with clearly
    defined access interface
  • Each term is defined in a package and has its
    scope
  • Eg public, private
  • Constructor P (Bao and Honavar 2004)

9
Interface
10
Ontology Language Extension- to handle
inconsistency
  • A t, but A,B ! t
  • A DisjointClasses(Plant,Animal)
  • A SubClassOf( Dog , Carnivore )
  • A SubClassOf( Carnivore, Animal)restriction(eats
    allValueFrom(Animal)) -t
  • B SubClassOf( Grass , Plant )
  • BSubClassOf( SickDog, Dog)restriction(eats
    someValueFrom(Grass))
  • This can be resolved with defeasible axioms
  • Partial orders are assigned to axioms stronger
    axioms can defeat weaker axioms.
  • Constructor O ( Heymans 2002)

11
Example with P and O constructors
  • Two packages
  • (2d) defeats the general rule (1g).

12
Outline
  • Overview
  • Ontology Language Extension
  • Wiki_at_nt Architecture

13
Wiki_at_nt
  • Using wiki to edit OSHOQP(D) ontology.
  • An ontology module is composed of one or more
    wiki pages
  • Multiple users can edit the same content, with
    wiki version control, transaction management and
    memory management.
  • An ontology is saved intoor loaded from a set of
    wiki pages and managed by an ontology
    repository.

14
  • http//boole.cs.iastate.edu9090/wikiont

15
Architecture Wiki Engine
  • Provides a web interface for ontology editor
  • Translates the Wiki_at_nt script to HTML code to be
    shown in the web browser.
  • Manages the storage of wiki pages, in plain file
    or database.
  • Provides version control.
  • Provides transaction management.
  • Provides memory management.
  • Compose/Decompose ontology lt-gt package
  • Based on JSPWiki engine

16
Architecture Wiki Engine/Markup Script
  • We defined a set of markup script tags as the
    syntax of the ontologies in Wiki_at_nt.
  • The syntax is an extension to OWL to support
    package and partial order on axioms.
  • Wiki markup script is a human readable syntax
    equivalent to the N-Triple syntax. Each axiom is
    assigned a URI
  • Eg animalDog rdfssubClassOfanimalCarnivor
    e
  • Shown as
  • P and O axioms can be presented in triple
    syntax.
  • term_uri powlpublicpkg_uri
  • uri1wikistrongeruri2

17
Script Example
  • test..AnonymousClass107107\\
  • test..AnonymousClass107107
    owl..allValuesFrom camera..BodyWithNonAdjustabl
    eShutterSpeed\\
  • test..AnonymousClass107107 owl..onProperty
    camera..body\\
  • test..AnonymousClass107107 rdf..type
    owl..Restriction\\
  • camera..Large-Format\\
  • camera..Large-Format rdf..type
    owl..Class\\
  • camera..Large-Format rdfs..subClassOf
    test..AnonymousClass107107\\
  • camera..Large-Format rdfs..subClassOf
    camera..Camera\\

http//boole.cs.iastate.edu9090/wikiont/Wiki.jsp?
pagecamera..Large-Format
18
Architecture Wiki Engine/Modularization
Package
  • An ontology could be composed by several
    packages, and one package could be reused by
    multiple ontologies.
  • A package is a logic module for an ontology,
    usually from a single author.
  • A block is a set of related axioms inside a
    package, and will be physically mapped to a wiki
    page.
  • In Wiki_at_nt, we choose axiom groups as ontology
    blocks. Each axiom group contains triples with
    same subject.
  • For example,the axiom groups in Animal Ontology
    package(1) will be Dog, Carnivore, eats, and
    billy.

axiom
Block/WikiPage
Ontology
19
Architecture Wiki Engine/Inconsistency
  • Inconsistency among modules should be resolved
    when integrating the modules.
  • We assume each package should be consistent.
  • A partial order can be specified on
  • package level, eg. Package1 wikistrongerPack
    age2,
  • axiom level, eg.Package11gwikistrongerPacka
    ge22d.
  • Default defeating rules
  • Local-first a local package axiom defeats axiom
    from imported package
  • Higher-first social order of the author, eg.
    administrator defeats common user

20
Architecture Wiki Engine/Memory Mgmt
  • While most of the popular ontology editors have
    in-memory model for edited ontology, Wiki_at_nt
    doesn't.
  • An in-memory model limits the scalability of the
    system
  • In-memory model implicitly assumes the existence
    of a global ontology, requires monotonicity.
  • We store ontology as a set of separated, possibly
    distributed blocks in Wiki_at_nt.
  • Each block is serialized to a wiki page when it's
    not being actively edited, and is loaded into
    memory only when it's needed.
  • A (local or remote) partial ontology model is
    dynamically loaded into local memory during an
    editing or reasoning process, from a set of pages.

21
Architecture Wiki Engine/Transaction Mgmt
  • Wiki_at_nt denies the write-access of agents to a
    page and related pages if it is locked by some
    other agents.
  • If a class is under editing/lock, its
    superclasses in the class hierarchy and its
    instances will be locked.
  • If a property is under editing/lock, its
    superproperties in the property hierarchy will be
    locked.
  • If a concept, property or instance is under
    editing/lock, all other concepts, properties or
    instances in the same wikipage(axiom group) will
    be locked.
  • If a package is locked, all packages that import
    it will be locked.
  • Locking is propagated by recursively applying
    these rules.

22
Architecture Agent Management
  • Each participant in Wiki_at_nt is considered as an
    agent.
  • Each agent is assigned different privileges, such
    as ontology administrator and package manager.
  • An agent can become an editor of an existing
    ontology module or create a new module.
  • RPC interface is reserved for software agents.

23
Architecture Ontology I/O
  • We can export wiki pages as a single ontology
    file, or read an ontology file into Wiki Ontology
    Repository.
  • The relevant portion of an ontology is extracted
    or assembled from the wiki pages.
  • Each loaded ontology is assigned a unique name,
    eg. http//mydomain.org/animal/
  • Reduce to standard OWL
  • Package could be eliminated by adding a prefix to
    its axioms, eg package1.Dog
  • Defeated axioms will be removed

24
Outline
  • Overview
  • Ontology Language Extension
  • Wiki_at_nt Architecture
  • Closing Remarks

25
Future work
  • Better transaction management
  • What is sufficient local model in reasoning?
    For memory management
  • Better policy to assign partial order over axioms
  • Better graphic, interactive UI
  • Java/Applet client
  • Plugins for Protégé ?
  • More formal versioning representation
  • A reasoner over POOWL
  • Scalability test
  • Many others

26
Thank you !
  • Contact
  • Jie Bao
  • 215 Atanasoff Hall, Iowa State University
  • Ames IA 50010 USA
  • Baojie_at_cs.iastate.edu
  • 1-515-441-0491, 1-515-294-7331
  • http//www.cs.iastate.edu/baojie
  • More Information
  • Bao, Jie and Honavar, Vasant (2004) Ontology
    Language Extensions to Support Localized
    Semantics, Modular Reasoning, and Collaborative
    Ontology Design and Ontology Reuse . Technical
    Report, Computer Sicence, Iowa State University.
  • Bao, Jie and Honavar, Vasant (2004) Collaborative
    Ontology Building with Wiki_at_nt - A multi-agent
    based ontology building environment . Technical
    Report, Computer Science, Iowa State University.

27
Backups
28
_at_ntHill Whole Picture
C
D
A
Ontology Alignment
Human Expert
Wiki_at_nt
P-OWL
Agents Ontology Mining
Browser
OntologyRepository
B
SemanticRSS-awareChannel
Email list
Wiki
  • Version Control
  • Redundancy Check
  • Conflict Check
  • Cross Validation

SemanticRSS-awareChannel
Newsgroup
Blog
Forum
P2P node
SemanticRSS-awareChannel
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