Neighbor Joining Algorithm - PowerPoint PPT Presentation

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Neighbor Joining Algorithm

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{ Find i,j in L such that Dij is minimal. Add new node k to T. Let dik = 1/2(dij ri-rj); djk = dij - dik. Let dkm = 1/2(dim djm-dij) for all other m in L ... – PowerPoint PPT presentation

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Title: Neighbor Joining Algorithm


1
Neighbor Joining Algorithm
L T set of leaf nodes While L gt 2 Find
i,j in L such that Dij is minimal Add new node k
to T Let dik 1/2(dijri-rj) djk dij -
dik Let dkm 1/2(dimdjm-dij) for all other m
in L Remove i and j from L Let Dkm dkm -
(rkrm) for all m in L Add k to L Join
remaining two nodes in L
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