May Lab Objectives

1
May Lab Objectives

• Evolutionary analysis of the I2 R-gene family
• Mapping of I2 homologs in tomato and potato
  genomes.
• Web presentation of BioInformatic tools and
  Instructional Resources

2
University of Minnesota

• Brett Couch I2-homolog mapping
• Ethy Cannon, Georgiana, Brett web
• Steve Cannon with Medicago group

3
BioInformatic Tools and Instructional Resources

• Modification of ATV
• Interactive access to data and results
• Integration of phylogenetic and genomic data
• Instructional resources planned

4
Access to Sequence Alignments
5
ATV Screen Shot of I2 Phylogeny
6
ATV Screen Shot of Phylogenetic and EST
Expression Data
7
ATV Screen Shot of I2 Phylogeny
8
Screen Shot of Sample Tomato Mapping Data
9
Inquiry Based Data Tour
Genome Data
ATV
ATV
Lab DataBase in Excel
progress report
10
E-mail
11
Plans for the future

• Linkages such as Map data -gt Tree
• Pull in larger data sets
• Resistance gene sequences, EST data for
  Solanaceae -gt SOLAR
• Genome data (Arizona, project PIs)
• Stand-alone ATV package
• Instructional Resources
• What do you want to see?