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From the iCAPTURer to McManusInformaticus
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Title: From the iCAPTURer to McManusInformaticus
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From the iCAPTURer to McManus-Informaticus
- Benjamin Good
- Wilkinson Laboratory
- iCAPTURE Centre, UBC
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A Brief History of Ben
- 1998 BS, UC San Diego,
- Cognitive Science
- 1999 Knowledge Engineer, SAIC
- 2000 MSc Sussex Uni., UK,
- Evolutionary and Adaptive Systems
- (clever computer programs)
- 00-03 Bioinformatician, UCSD, CFAR
- now - PhD student, Bioinformatics Training
Programme
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Knowledge Based Systems
- Software systems that contain representations of
human knowledge and can thus emulate human
behaviour (to some extent).
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Knowledge Based Systemsin practice
- 1997 IBM computer program Deep Blue defeats world
chess champion
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BHAG
- McManus-Informaticus
- Deep Blue for Biomedical Research.
- What are the Biomarkers of allograft rejection
likely to be? - Hypothesis generation
- Hypothesis validation
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Knowledge Representation
Is hard and takes a lot of time
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Neurosurgery?
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The iCAPTURer
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First Trial at YI Forum
- 2 days to build the YI Ontology
- 68 volunteers
- 665 terms collected
- 326 is a kind of relations collected
- 340 same as relations collected
- Quality assessment underway
- Manuscript in preparation
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Thanks to Dr. McManus
- For hiring Dr. Mark Wilkinson
- For suggesting I go to the YI Forum
- For introducing me to the term BHAG
- For posing in one of my most frequently used
slides - And for sending me this in an email
- thanks especially for pushing boundaries.
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